Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4961 | 15106;15107;15108 | chr2:178735565;178735564;178735563 | chr2:179600292;179600291;179600290 |
N2AB | 4644 | 14155;14156;14157 | chr2:178735565;178735564;178735563 | chr2:179600292;179600291;179600290 |
N2A | 3717 | 11374;11375;11376 | chr2:178735565;178735564;178735563 | chr2:179600292;179600291;179600290 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1298192031 | -0.232 | 0.998 | N | 0.743 | 0.3 | 0.373537453441 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
T/I | rs1298192031 | -0.232 | 0.998 | N | 0.743 | 0.3 | 0.373537453441 | gnomAD-4.0.0 | 1.59675E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86285E-06 | 0 | 0 |
T/R | None | None | 0.999 | N | 0.814 | 0.381 | 0.397838977388 | gnomAD-4.0.0 | 1.59675E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86285E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0874 | likely_benign | 0.0926 | benign | -1.014 | Destabilizing | 0.996 | D | 0.593 | neutral | D | 0.610088984 | None | None | N |
T/C | 0.3664 | ambiguous | 0.4115 | ambiguous | -0.877 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
T/D | 0.4098 | ambiguous | 0.4594 | ambiguous | -0.932 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
T/E | 0.2547 | likely_benign | 0.2822 | benign | -0.905 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
T/F | 0.1444 | likely_benign | 0.1541 | benign | -1.315 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
T/G | 0.2834 | likely_benign | 0.3153 | benign | -1.242 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
T/H | 0.1887 | likely_benign | 0.2015 | benign | -1.565 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
T/I | 0.0945 | likely_benign | 0.0997 | benign | -0.487 | Destabilizing | 0.998 | D | 0.743 | deleterious | N | 0.498825173 | None | None | N |
T/K | 0.1641 | likely_benign | 0.1751 | benign | -0.603 | Destabilizing | 0.999 | D | 0.748 | deleterious | N | 0.394537178 | None | None | N |
T/L | 0.0764 | likely_benign | 0.0793 | benign | -0.487 | Destabilizing | 0.994 | D | 0.671 | neutral | None | None | None | None | N |
T/M | 0.0742 | likely_benign | 0.0748 | benign | -0.107 | Destabilizing | 0.985 | D | 0.563 | neutral | None | None | None | None | N |
T/N | 0.1322 | likely_benign | 0.1447 | benign | -0.749 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
T/P | 0.5694 | likely_pathogenic | 0.6218 | pathogenic | -0.634 | Destabilizing | 1.0 | D | 0.813 | deleterious | D | 0.676178714 | None | None | N |
T/Q | 0.1859 | likely_benign | 0.1954 | benign | -1.019 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
T/R | 0.1251 | likely_benign | 0.1311 | benign | -0.373 | Destabilizing | 0.999 | D | 0.814 | deleterious | N | 0.471535028 | None | None | N |
T/S | 0.109 | likely_benign | 0.1159 | benign | -1.004 | Destabilizing | 0.998 | D | 0.582 | neutral | N | 0.512486055 | None | None | N |
T/V | 0.0953 | likely_benign | 0.1011 | benign | -0.634 | Destabilizing | 0.994 | D | 0.587 | neutral | None | None | None | None | N |
T/W | 0.4443 | ambiguous | 0.4767 | ambiguous | -1.241 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
T/Y | 0.2105 | likely_benign | 0.2238 | benign | -0.933 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.