Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4985 | 15178;15179;15180 | chr2:178734971;178734970;178734969 | chr2:179599698;179599697;179599696 |
N2AB | 4668 | 14227;14228;14229 | chr2:178734971;178734970;178734969 | chr2:179599698;179599697;179599696 |
N2A | 3741 | 11446;11447;11448 | chr2:178734971;178734970;178734969 | chr2:179599698;179599697;179599696 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs750177841 | -0.205 | 0.989 | N | 0.441 | 0.224 | 0.282575091529 | gnomAD-2.1.1 | 5.67E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 4.50586E-04 | None | 0 | 0 | 0 |
K/T | rs750177841 | -0.205 | 0.989 | N | 0.441 | 0.224 | 0.282575091529 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 4.14422E-04 | 0 |
K/T | rs750177841 | -0.205 | 0.989 | N | 0.441 | 0.224 | 0.282575091529 | gnomAD-4.0.0 | 2.45542E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.31504E-04 | 1.62543E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.761 | likely_pathogenic | 0.8353 | pathogenic | -0.499 | Destabilizing | 0.996 | D | 0.443 | neutral | None | None | None | None | N |
K/C | 0.9107 | likely_pathogenic | 0.9293 | pathogenic | -0.402 | Destabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | N |
K/D | 0.8886 | likely_pathogenic | 0.9267 | pathogenic | -0.093 | Destabilizing | 0.995 | D | 0.444 | neutral | None | None | None | None | N |
K/E | 0.4319 | ambiguous | 0.515 | ambiguous | 0.029 | Stabilizing | 0.989 | D | 0.431 | neutral | N | 0.453239198 | None | None | N |
K/F | 0.9551 | likely_pathogenic | 0.9646 | pathogenic | -0.067 | Destabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
K/G | 0.7755 | likely_pathogenic | 0.843 | pathogenic | -0.877 | Destabilizing | 0.992 | D | 0.437 | neutral | None | None | None | None | N |
K/H | 0.5607 | ambiguous | 0.6379 | pathogenic | -1.153 | Destabilizing | 0.999 | D | 0.495 | neutral | None | None | None | None | N |
K/I | 0.7796 | likely_pathogenic | 0.8163 | pathogenic | 0.486 | Stabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | N |
K/L | 0.7065 | likely_pathogenic | 0.7444 | pathogenic | 0.486 | Stabilizing | 0.999 | D | 0.45 | neutral | None | None | None | None | N |
K/M | 0.5703 | likely_pathogenic | 0.6146 | pathogenic | 0.266 | Stabilizing | 1.0 | D | 0.489 | neutral | N | 0.478960355 | None | None | N |
K/N | 0.8032 | likely_pathogenic | 0.8585 | pathogenic | -0.417 | Destabilizing | 0.733 | D | 0.254 | neutral | N | 0.443790687 | None | None | N |
K/P | 0.962 | likely_pathogenic | 0.9764 | pathogenic | 0.188 | Stabilizing | 1.0 | D | 0.498 | neutral | None | None | None | None | N |
K/Q | 0.221 | likely_benign | 0.2796 | benign | -0.41 | Destabilizing | 0.998 | D | 0.457 | neutral | N | 0.449747832 | None | None | N |
K/R | 0.0989 | likely_benign | 0.1065 | benign | -0.627 | Destabilizing | 0.543 | D | 0.262 | neutral | N | 0.452760023 | None | None | N |
K/S | 0.7708 | likely_pathogenic | 0.8354 | pathogenic | -1.009 | Destabilizing | 0.992 | D | 0.425 | neutral | None | None | None | None | N |
K/T | 0.5253 | ambiguous | 0.6144 | pathogenic | -0.679 | Destabilizing | 0.989 | D | 0.441 | neutral | N | 0.448198013 | None | None | N |
K/V | 0.7122 | likely_pathogenic | 0.7597 | pathogenic | 0.188 | Stabilizing | 0.999 | D | 0.548 | neutral | None | None | None | None | N |
K/W | 0.9018 | likely_pathogenic | 0.9197 | pathogenic | 0.009 | Stabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
K/Y | 0.8871 | likely_pathogenic | 0.9079 | pathogenic | 0.266 | Stabilizing | 1.0 | D | 0.543 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.