Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4993 | 15202;15203;15204 | chr2:178734947;178734946;178734945 | chr2:179599674;179599673;179599672 |
N2AB | 4676 | 14251;14252;14253 | chr2:178734947;178734946;178734945 | chr2:179599674;179599673;179599672 |
N2A | 3749 | 11470;11471;11472 | chr2:178734947;178734946;178734945 | chr2:179599674;179599673;179599672 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | None | None | 0.028 | N | 0.279 | 0.122 | 0.419713421852 | gnomAD-4.0.0 | 1.60967E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89059E-06 | 0 | 0 |
M/V | None | None | 0.001 | N | 0.117 | 0.151 | 0.298745278005 | gnomAD-4.0.0 | 1.61024E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44923E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.6477 | likely_pathogenic | 0.7547 | pathogenic | -2.161 | Highly Destabilizing | 0.07 | N | 0.275 | neutral | None | None | None | None | I |
M/C | 0.8588 | likely_pathogenic | 0.8988 | pathogenic | -1.862 | Destabilizing | 0.901 | D | 0.406 | neutral | None | None | None | None | I |
M/D | 0.9817 | likely_pathogenic | 0.9894 | pathogenic | -1.344 | Destabilizing | 0.722 | D | 0.551 | neutral | None | None | None | None | I |
M/E | 0.8842 | likely_pathogenic | 0.9263 | pathogenic | -1.213 | Destabilizing | 0.46 | N | 0.398 | neutral | None | None | None | None | I |
M/F | 0.4824 | ambiguous | 0.5554 | ambiguous | -0.735 | Destabilizing | 0.08 | N | 0.34 | neutral | None | None | None | None | I |
M/G | 0.8663 | likely_pathogenic | 0.9076 | pathogenic | -2.567 | Highly Destabilizing | 0.26 | N | 0.381 | neutral | None | None | None | None | I |
M/H | 0.7713 | likely_pathogenic | 0.8405 | pathogenic | -1.81 | Destabilizing | 0.901 | D | 0.465 | neutral | None | None | None | None | I |
M/I | 0.503 | ambiguous | 0.6202 | pathogenic | -1.04 | Destabilizing | 0.028 | N | 0.279 | neutral | N | 0.39830955 | None | None | I |
M/K | 0.3984 | ambiguous | 0.5091 | ambiguous | -1.299 | Destabilizing | 0.21 | N | 0.371 | neutral | N | 0.466000906 | None | None | I |
M/L | 0.0868 | likely_benign | 0.1054 | benign | -1.04 | Destabilizing | None | N | 0.103 | neutral | N | 0.362232886 | None | None | I |
M/N | 0.8978 | likely_pathogenic | 0.9363 | pathogenic | -1.351 | Destabilizing | 0.722 | D | 0.492 | neutral | None | None | None | None | I |
M/P | 0.9631 | likely_pathogenic | 0.9839 | pathogenic | -1.391 | Destabilizing | 0.722 | D | 0.505 | neutral | None | None | None | None | I |
M/Q | 0.4865 | ambiguous | 0.5832 | pathogenic | -1.254 | Destabilizing | 0.722 | D | 0.387 | neutral | None | None | None | None | I |
M/R | 0.4304 | ambiguous | 0.5241 | ambiguous | -0.984 | Destabilizing | 0.391 | N | 0.439 | neutral | N | 0.456861703 | None | None | I |
M/S | 0.7645 | likely_pathogenic | 0.8274 | pathogenic | -1.985 | Destabilizing | 0.26 | N | 0.379 | neutral | None | None | None | None | I |
M/T | 0.5776 | likely_pathogenic | 0.7024 | pathogenic | -1.742 | Destabilizing | 0.116 | N | 0.349 | neutral | N | 0.434072639 | None | None | I |
M/V | 0.155 | likely_benign | 0.2088 | benign | -1.391 | Destabilizing | 0.001 | N | 0.117 | neutral | N | 0.259962311 | None | None | I |
M/W | 0.8378 | likely_pathogenic | 0.8868 | pathogenic | -0.85 | Destabilizing | None | N | 0.174 | neutral | None | None | None | None | I |
M/Y | 0.762 | likely_pathogenic | 0.8267 | pathogenic | -0.897 | Destabilizing | 0.148 | N | 0.393 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.