Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4994 | 15205;15206;15207 | chr2:178734944;178734943;178734942 | chr2:179599671;179599670;179599669 |
N2AB | 4677 | 14254;14255;14256 | chr2:178734944;178734943;178734942 | chr2:179599671;179599670;179599669 |
N2A | 3750 | 11473;11474;11475 | chr2:178734944;178734943;178734942 | chr2:179599671;179599670;179599669 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.037 | N | 0.311 | 0.073 | 0.395745362164 | gnomAD-4.0.0 | 1.60867E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8889E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2643 | likely_benign | 0.304 | benign | -0.934 | Destabilizing | 0.129 | N | 0.452 | neutral | None | None | None | None | I |
L/C | 0.58 | likely_pathogenic | 0.6515 | pathogenic | -0.725 | Destabilizing | 0.983 | D | 0.431 | neutral | None | None | None | None | I |
L/D | 0.7199 | likely_pathogenic | 0.7825 | pathogenic | -0.606 | Destabilizing | 0.418 | N | 0.507 | neutral | None | None | None | None | I |
L/E | 0.3361 | likely_benign | 0.4184 | ambiguous | -0.67 | Destabilizing | 0.264 | N | 0.512 | neutral | None | None | None | None | I |
L/F | 0.1508 | likely_benign | 0.1869 | benign | -0.743 | Destabilizing | 0.655 | D | 0.373 | neutral | N | 0.513628507 | None | None | I |
L/G | 0.514 | ambiguous | 0.5746 | pathogenic | -1.147 | Destabilizing | 0.418 | N | 0.492 | neutral | None | None | None | None | I |
L/H | 0.2008 | likely_benign | 0.2396 | benign | -0.336 | Destabilizing | 0.921 | D | 0.495 | neutral | N | 0.509293798 | None | None | I |
L/I | 0.0971 | likely_benign | 0.1132 | benign | -0.472 | Destabilizing | 0.002 | N | 0.263 | neutral | N | 0.497635111 | None | None | I |
L/K | 0.1478 | likely_benign | 0.1821 | benign | -0.709 | Destabilizing | None | N | 0.288 | neutral | None | None | None | None | I |
L/M | 0.1144 | likely_benign | 0.125 | benign | -0.496 | Destabilizing | 0.716 | D | 0.374 | neutral | None | None | None | None | I |
L/N | 0.3683 | ambiguous | 0.4251 | ambiguous | -0.539 | Destabilizing | 0.418 | N | 0.505 | neutral | None | None | None | None | I |
L/P | 0.3343 | likely_benign | 0.3535 | ambiguous | -0.593 | Destabilizing | 0.794 | D | 0.5 | neutral | N | 0.488645922 | None | None | I |
L/Q | 0.1109 | likely_benign | 0.1372 | benign | -0.756 | Destabilizing | 0.716 | D | 0.495 | neutral | None | None | None | None | I |
L/R | 0.123 | likely_benign | 0.1494 | benign | -0.079 | Destabilizing | 0.213 | N | 0.495 | neutral | N | 0.458646154 | None | None | I |
L/S | 0.2881 | likely_benign | 0.335 | benign | -0.989 | Destabilizing | 0.129 | N | 0.494 | neutral | None | None | None | None | I |
L/T | 0.2161 | likely_benign | 0.2493 | benign | -0.945 | Destabilizing | 0.01 | N | 0.252 | neutral | None | None | None | None | I |
L/V | 0.0941 | likely_benign | 0.1048 | benign | -0.593 | Destabilizing | 0.037 | N | 0.311 | neutral | N | 0.489795476 | None | None | I |
L/W | 0.3144 | likely_benign | 0.3747 | ambiguous | -0.777 | Destabilizing | 0.983 | D | 0.513 | neutral | None | None | None | None | I |
L/Y | 0.3406 | ambiguous | 0.4089 | ambiguous | -0.553 | Destabilizing | 0.836 | D | 0.439 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.