Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5012 | 15259;15260;15261 | chr2:178734890;178734889;178734888 | chr2:179599617;179599616;179599615 |
N2AB | 4695 | 14308;14309;14310 | chr2:178734890;178734889;178734888 | chr2:179599617;179599616;179599615 |
N2A | 3768 | 11527;11528;11529 | chr2:178734890;178734889;178734888 | chr2:179599617;179599616;179599615 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.002 | N | 0.151 | 0.36 | 0.213573922156 | gnomAD-4.0.0 | 1.5922E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.78102E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2657 | likely_benign | 0.3041 | benign | -0.13 | Destabilizing | 0.495 | N | 0.431 | neutral | None | None | None | None | I |
Q/C | 0.7144 | likely_pathogenic | 0.6508 | pathogenic | -0.004 | Destabilizing | 0.995 | D | 0.503 | neutral | None | None | None | None | I |
Q/D | 0.308 | likely_benign | 0.4052 | ambiguous | 0.15 | Stabilizing | 0.828 | D | 0.397 | neutral | None | None | None | None | I |
Q/E | 0.0741 | likely_benign | 0.0852 | benign | 0.163 | Stabilizing | 0.425 | N | 0.315 | neutral | N | 0.445094729 | None | None | I |
Q/F | 0.7354 | likely_pathogenic | 0.7544 | pathogenic | -0.228 | Destabilizing | 0.944 | D | 0.527 | neutral | None | None | None | None | I |
Q/G | 0.3267 | likely_benign | 0.3557 | ambiguous | -0.353 | Destabilizing | 0.828 | D | 0.503 | neutral | None | None | None | None | I |
Q/H | 0.1518 | likely_benign | 0.1642 | benign | -0.124 | Destabilizing | 0.002 | N | 0.151 | neutral | N | 0.469072116 | None | None | I |
Q/I | 0.4576 | ambiguous | 0.4989 | ambiguous | 0.375 | Stabilizing | 0.981 | D | 0.539 | neutral | None | None | None | None | I |
Q/K | 0.0804 | likely_benign | 0.0847 | benign | 0.091 | Stabilizing | 0.01 | N | 0.159 | neutral | N | 0.397342756 | None | None | I |
Q/L | 0.1842 | likely_benign | 0.2026 | benign | 0.375 | Stabilizing | 0.642 | D | 0.504 | neutral | N | 0.508656087 | None | None | I |
Q/M | 0.4347 | ambiguous | 0.4758 | ambiguous | 0.341 | Stabilizing | 0.981 | D | 0.516 | neutral | None | None | None | None | I |
Q/N | 0.2452 | likely_benign | 0.3007 | benign | -0.404 | Destabilizing | 0.704 | D | 0.403 | neutral | None | None | None | None | I |
Q/P | 0.4729 | ambiguous | 0.5391 | ambiguous | 0.236 | Stabilizing | 0.917 | D | 0.562 | neutral | N | 0.513449635 | None | None | I |
Q/R | 0.0891 | likely_benign | 0.0861 | benign | 0.204 | Stabilizing | 0.023 | N | 0.171 | neutral | N | 0.433740247 | None | None | I |
Q/S | 0.261 | likely_benign | 0.3041 | benign | -0.387 | Destabilizing | 0.495 | N | 0.411 | neutral | None | None | None | None | I |
Q/T | 0.1899 | likely_benign | 0.2262 | benign | -0.204 | Destabilizing | 0.828 | D | 0.493 | neutral | None | None | None | None | I |
Q/V | 0.3229 | likely_benign | 0.3658 | ambiguous | 0.236 | Stabilizing | 0.828 | D | 0.567 | neutral | None | None | None | None | I |
Q/W | 0.5409 | ambiguous | 0.5268 | ambiguous | -0.22 | Destabilizing | 0.995 | D | 0.509 | neutral | None | None | None | None | I |
Q/Y | 0.4728 | ambiguous | 0.4765 | ambiguous | 0.058 | Stabilizing | 0.704 | D | 0.571 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.