Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5018 | 15277;15278;15279 | chr2:178734872;178734871;178734870 | chr2:179599599;179599598;179599597 |
N2AB | 4701 | 14326;14327;14328 | chr2:178734872;178734871;178734870 | chr2:179599599;179599598;179599597 |
N2A | 3774 | 11545;11546;11547 | chr2:178734872;178734871;178734870 | chr2:179599599;179599598;179599597 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.201 | D | 0.437 | 0.262 | 0.149567049428 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 1.90042E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.6297 | likely_pathogenic | 0.6547 | pathogenic | -0.718 | Destabilizing | 0.399 | N | 0.543 | neutral | None | None | None | None | N |
N/C | 0.6884 | likely_pathogenic | 0.7409 | pathogenic | 0.212 | Stabilizing | 0.982 | D | 0.669 | neutral | None | None | None | None | N |
N/D | 0.1466 | likely_benign | 0.1382 | benign | 0.112 | Stabilizing | 0.001 | N | 0.233 | neutral | N | 0.44576975 | None | None | N |
N/E | 0.6153 | likely_pathogenic | 0.6241 | pathogenic | 0.11 | Stabilizing | 0.25 | N | 0.433 | neutral | None | None | None | None | N |
N/F | 0.8928 | likely_pathogenic | 0.9058 | pathogenic | -0.941 | Destabilizing | 0.982 | D | 0.667 | neutral | None | None | None | None | N |
N/G | 0.3881 | ambiguous | 0.4041 | ambiguous | -0.937 | Destabilizing | 0.399 | N | 0.423 | neutral | None | None | None | None | N |
N/H | 0.3017 | likely_benign | 0.3166 | benign | -0.893 | Destabilizing | 0.781 | D | 0.53 | neutral | D | 0.61447358 | None | None | N |
N/I | 0.8292 | likely_pathogenic | 0.8402 | pathogenic | -0.211 | Destabilizing | 0.781 | D | 0.695 | prob.neutral | D | 0.615735949 | None | None | N |
N/K | 0.6655 | likely_pathogenic | 0.6798 | pathogenic | -0.022 | Destabilizing | 0.334 | N | 0.473 | neutral | N | 0.51559029 | None | None | N |
N/L | 0.7443 | likely_pathogenic | 0.7477 | pathogenic | -0.211 | Destabilizing | 0.7 | D | 0.683 | prob.neutral | None | None | None | None | N |
N/M | 0.7398 | likely_pathogenic | 0.7547 | pathogenic | 0.264 | Stabilizing | 0.982 | D | 0.62 | neutral | None | None | None | None | N |
N/P | 0.9878 | likely_pathogenic | 0.987 | pathogenic | -0.353 | Destabilizing | 0.826 | D | 0.626 | neutral | None | None | None | None | N |
N/Q | 0.6031 | likely_pathogenic | 0.6095 | pathogenic | -0.525 | Destabilizing | 0.7 | D | 0.531 | neutral | None | None | None | None | N |
N/R | 0.7046 | likely_pathogenic | 0.7164 | pathogenic | 0.011 | Stabilizing | 0.7 | D | 0.537 | neutral | None | None | None | None | N |
N/S | 0.215 | likely_benign | 0.2148 | benign | -0.393 | Destabilizing | 0.201 | N | 0.437 | neutral | D | 0.551786342 | None | None | N |
N/T | 0.6268 | likely_pathogenic | 0.6267 | pathogenic | -0.225 | Destabilizing | 0.334 | N | 0.468 | neutral | D | 0.588128978 | None | None | N |
N/V | 0.8128 | likely_pathogenic | 0.825 | pathogenic | -0.353 | Destabilizing | 0.826 | D | 0.691 | prob.neutral | None | None | None | None | N |
N/W | 0.938 | likely_pathogenic | 0.9441 | pathogenic | -0.807 | Destabilizing | 0.982 | D | 0.663 | neutral | None | None | None | None | N |
N/Y | 0.4125 | ambiguous | 0.4383 | ambiguous | -0.592 | Destabilizing | 0.916 | D | 0.615 | neutral | D | 0.615735949 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.