Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5019 | 15280;15281;15282 | chr2:178734869;178734868;178734867 | chr2:179599596;179599595;179599594 |
N2AB | 4702 | 14329;14330;14331 | chr2:178734869;178734868;178734867 | chr2:179599596;179599595;179599594 |
N2A | 3775 | 11548;11549;11550 | chr2:178734869;178734868;178734867 | chr2:179599596;179599595;179599594 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.826 | N | 0.297 | 0.188 | 0.104622674875 | gnomAD-4.0.0 | 4.78995E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79899E-06 | 5.7971E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3778 | ambiguous | 0.2906 | benign | -0.231 | Destabilizing | 0.939 | D | 0.326 | neutral | None | None | None | None | N |
N/C | 0.5102 | ambiguous | 0.4279 | ambiguous | 0.192 | Stabilizing | 0.999 | D | 0.463 | neutral | None | None | None | None | N |
N/D | 0.1228 | likely_benign | 0.1058 | benign | 0.313 | Stabilizing | 0.015 | N | 0.143 | neutral | N | 0.395073778 | None | None | N |
N/E | 0.3883 | ambiguous | 0.3241 | benign | 0.264 | Stabilizing | 0.079 | N | 0.135 | neutral | None | None | None | None | N |
N/F | 0.7435 | likely_pathogenic | 0.6548 | pathogenic | -0.769 | Destabilizing | 0.997 | D | 0.428 | neutral | None | None | None | None | N |
N/G | 0.2185 | likely_benign | 0.1693 | benign | -0.352 | Destabilizing | 0.863 | D | 0.267 | neutral | None | None | None | None | N |
N/H | 0.1418 | likely_benign | 0.1126 | benign | -0.329 | Destabilizing | 0.996 | D | 0.355 | neutral | N | 0.443264363 | None | None | N |
N/I | 0.5766 | likely_pathogenic | 0.4982 | ambiguous | -0.011 | Destabilizing | 0.996 | D | 0.434 | neutral | D | 0.569130619 | None | None | N |
N/K | 0.3645 | ambiguous | 0.2769 | benign | 0.19 | Stabilizing | 0.92 | D | 0.27 | neutral | N | 0.450266596 | None | None | N |
N/L | 0.4684 | ambiguous | 0.3836 | ambiguous | -0.011 | Destabilizing | 0.991 | D | 0.433 | neutral | None | None | None | None | N |
N/M | 0.5384 | ambiguous | 0.4666 | ambiguous | 0.114 | Stabilizing | 0.999 | D | 0.402 | neutral | None | None | None | None | N |
N/P | 0.9033 | likely_pathogenic | 0.8549 | pathogenic | -0.06 | Destabilizing | 0.997 | D | 0.414 | neutral | None | None | None | None | N |
N/Q | 0.3367 | likely_benign | 0.2652 | benign | -0.233 | Destabilizing | 0.939 | D | 0.329 | neutral | None | None | None | None | N |
N/R | 0.421 | ambiguous | 0.319 | benign | 0.252 | Stabilizing | 0.939 | D | 0.345 | neutral | None | None | None | None | N |
N/S | 0.0936 | likely_benign | 0.0828 | benign | -0.054 | Destabilizing | 0.826 | D | 0.297 | neutral | N | 0.450586767 | None | None | N |
N/T | 0.2517 | likely_benign | 0.2095 | benign | 0.032 | Stabilizing | 0.959 | D | 0.288 | neutral | N | 0.451358175 | None | None | N |
N/V | 0.5807 | likely_pathogenic | 0.4815 | ambiguous | -0.06 | Destabilizing | 0.991 | D | 0.429 | neutral | None | None | None | None | N |
N/W | 0.8685 | likely_pathogenic | 0.8112 | pathogenic | -0.838 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
N/Y | 0.2984 | likely_benign | 0.2422 | benign | -0.528 | Destabilizing | 0.996 | D | 0.398 | neutral | N | 0.504133809 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.