Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5024 | 15295;15296;15297 | chr2:178734854;178734853;178734852 | chr2:179599581;179599580;179599579 |
N2AB | 4707 | 14344;14345;14346 | chr2:178734854;178734853;178734852 | chr2:179599581;179599580;179599579 |
N2A | 3780 | 11563;11564;11565 | chr2:178734854;178734853;178734852 | chr2:179599581;179599580;179599579 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.051 | N | 0.189 | 0.141 | 0.393006254552 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
E/G | rs2081168482 | None | 0.625 | N | 0.307 | 0.217 | 0.515995215087 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/K | rs750031855 | 0.099 | 0.801 | N | 0.217 | 0.224 | 0.430579932962 | gnomAD-2.1.1 | 7.15E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 7.18833E-04 | None | 1.30753E-04 | None | 0 | 1.56E-05 | 0 |
E/K | rs750031855 | 0.099 | 0.801 | N | 0.217 | 0.224 | 0.430579932962 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 5.77367E-04 | None | 0 | 0 | 0 | 2.07125E-04 | 0 |
E/K | rs750031855 | 0.099 | 0.801 | N | 0.217 | 0.224 | 0.430579932962 | gnomAD-4.0.0 | 1.92116E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.45951E-04 | None | 0 | 0 | 2.54286E-06 | 6.58762E-05 | 3.20266E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1283 | likely_benign | 0.1198 | benign | -0.142 | Destabilizing | 0.051 | N | 0.189 | neutral | N | 0.483302025 | None | None | N |
E/C | 0.8598 | likely_pathogenic | 0.8392 | pathogenic | 0.042 | Stabilizing | 0.998 | D | 0.361 | neutral | None | None | None | None | N |
E/D | 0.1233 | likely_benign | 0.1239 | benign | -0.168 | Destabilizing | 0.005 | N | 0.161 | neutral | N | 0.487665168 | None | None | N |
E/F | 0.7307 | likely_pathogenic | 0.7103 | pathogenic | -0.081 | Destabilizing | 0.991 | D | 0.362 | neutral | None | None | None | None | N |
E/G | 0.1451 | likely_benign | 0.1394 | benign | -0.315 | Destabilizing | 0.625 | D | 0.307 | neutral | N | 0.514603681 | None | None | N |
E/H | 0.4565 | ambiguous | 0.4228 | ambiguous | 0.239 | Stabilizing | 0.991 | D | 0.31 | neutral | None | None | None | None | N |
E/I | 0.3836 | ambiguous | 0.361 | ambiguous | 0.266 | Stabilizing | 0.974 | D | 0.386 | neutral | None | None | None | None | N |
E/K | 0.1413 | likely_benign | 0.1266 | benign | 0.497 | Stabilizing | 0.801 | D | 0.217 | neutral | N | 0.508329711 | None | None | N |
E/L | 0.3975 | ambiguous | 0.3747 | ambiguous | 0.266 | Stabilizing | 0.842 | D | 0.394 | neutral | None | None | None | None | N |
E/M | 0.482 | ambiguous | 0.4579 | ambiguous | 0.236 | Stabilizing | 0.998 | D | 0.341 | neutral | None | None | None | None | N |
E/N | 0.2475 | likely_benign | 0.2411 | benign | 0.224 | Stabilizing | 0.842 | D | 0.19 | neutral | None | None | None | None | N |
E/P | 0.3125 | likely_benign | 0.2831 | benign | 0.15 | Stabilizing | 0.016 | N | 0.207 | neutral | None | None | None | None | N |
E/Q | 0.1427 | likely_benign | 0.1309 | benign | 0.261 | Stabilizing | 0.891 | D | 0.301 | neutral | N | 0.508711417 | None | None | N |
E/R | 0.2612 | likely_benign | 0.2327 | benign | 0.668 | Stabilizing | 0.974 | D | 0.278 | neutral | None | None | None | None | N |
E/S | 0.1749 | likely_benign | 0.1704 | benign | 0.066 | Stabilizing | 0.172 | N | 0.145 | neutral | None | None | None | None | N |
E/T | 0.2099 | likely_benign | 0.1946 | benign | 0.21 | Stabilizing | 0.728 | D | 0.315 | neutral | None | None | None | None | N |
E/V | 0.2193 | likely_benign | 0.2065 | benign | 0.15 | Stabilizing | 0.801 | D | 0.365 | neutral | N | 0.517385057 | None | None | N |
E/W | 0.9014 | likely_pathogenic | 0.8856 | pathogenic | 0.019 | Stabilizing | 0.998 | D | 0.447 | neutral | None | None | None | None | N |
E/Y | 0.5864 | likely_pathogenic | 0.557 | ambiguous | 0.158 | Stabilizing | 0.991 | D | 0.351 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.