Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5036 | 15331;15332;15333 | chr2:178734818;178734817;178734816 | chr2:179599545;179599544;179599543 |
N2AB | 4719 | 14380;14381;14382 | chr2:178734818;178734817;178734816 | chr2:179599545;179599544;179599543 |
N2A | 3792 | 11599;11600;11601 | chr2:178734818;178734817;178734816 | chr2:179599545;179599544;179599543 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.642 | N | 0.513 | 0.255 | 0.343788945184 | gnomAD-4.0.0 | 1.59127E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8583E-06 | 0 | 0 |
E/K | rs1353528713 | -1.02 | 0.473 | N | 0.327 | 0.245 | 0.263140351381 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 9.95E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1353528713 | -1.02 | 0.473 | N | 0.327 | 0.245 | 0.263140351381 | gnomAD-4.0.0 | 1.59131E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76735E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3572 | ambiguous | 0.3377 | benign | -0.896 | Destabilizing | 0.27 | N | 0.447 | neutral | N | 0.512280469 | None | None | N |
E/C | 0.9633 | likely_pathogenic | 0.9542 | pathogenic | -0.656 | Destabilizing | 0.995 | D | 0.581 | neutral | None | None | None | None | N |
E/D | 0.2903 | likely_benign | 0.2907 | benign | -1.415 | Destabilizing | 0.642 | D | 0.32 | neutral | N | 0.472334853 | None | None | N |
E/F | 0.8947 | likely_pathogenic | 0.8941 | pathogenic | -0.494 | Destabilizing | 0.007 | N | 0.452 | neutral | None | None | None | None | N |
E/G | 0.5753 | likely_pathogenic | 0.5278 | ambiguous | -1.29 | Destabilizing | 0.642 | D | 0.513 | neutral | N | 0.444198534 | None | None | N |
E/H | 0.7107 | likely_pathogenic | 0.6943 | pathogenic | -1.015 | Destabilizing | 0.944 | D | 0.491 | neutral | None | None | None | None | N |
E/I | 0.5142 | ambiguous | 0.4986 | ambiguous | 0.19 | Stabilizing | 0.543 | D | 0.531 | neutral | None | None | None | None | N |
E/K | 0.3396 | likely_benign | 0.2908 | benign | -1.274 | Destabilizing | 0.473 | N | 0.327 | neutral | N | 0.490848369 | None | None | N |
E/L | 0.634 | likely_pathogenic | 0.6468 | pathogenic | 0.19 | Stabilizing | 0.329 | N | 0.511 | neutral | None | None | None | None | N |
E/M | 0.5927 | likely_pathogenic | 0.602 | pathogenic | 0.76 | Stabilizing | 0.944 | D | 0.563 | neutral | None | None | None | None | N |
E/N | 0.512 | ambiguous | 0.5007 | ambiguous | -1.581 | Destabilizing | 0.704 | D | 0.433 | neutral | None | None | None | None | N |
E/P | 0.9921 | likely_pathogenic | 0.9893 | pathogenic | -0.151 | Destabilizing | 0.944 | D | 0.575 | neutral | None | None | None | None | N |
E/Q | 0.2523 | likely_benign | 0.2362 | benign | -1.377 | Destabilizing | 0.065 | N | 0.231 | neutral | N | 0.493792622 | None | None | N |
E/R | 0.5783 | likely_pathogenic | 0.5163 | ambiguous | -1.083 | Destabilizing | 0.704 | D | 0.453 | neutral | None | None | None | None | N |
E/S | 0.415 | ambiguous | 0.4087 | ambiguous | -1.977 | Destabilizing | 0.085 | N | 0.159 | neutral | None | None | None | None | N |
E/T | 0.4175 | ambiguous | 0.3789 | ambiguous | -1.657 | Destabilizing | 0.543 | D | 0.47 | neutral | None | None | None | None | N |
E/V | 0.3039 | likely_benign | 0.296 | benign | -0.151 | Destabilizing | 0.002 | N | 0.296 | neutral | N | 0.420278344 | None | None | N |
E/W | 0.975 | likely_pathogenic | 0.9723 | pathogenic | -0.432 | Destabilizing | 0.995 | D | 0.591 | neutral | None | None | None | None | N |
E/Y | 0.8421 | likely_pathogenic | 0.8344 | pathogenic | -0.332 | Destabilizing | 0.807 | D | 0.572 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.