Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5038 | 15337;15338;15339 | chr2:178734812;178734811;178734810 | chr2:179599539;179599538;179599537 |
N2AB | 4721 | 14386;14387;14388 | chr2:178734812;178734811;178734810 | chr2:179599539;179599538;179599537 |
N2A | 3794 | 11605;11606;11607 | chr2:178734812;178734811;178734810 | chr2:179599539;179599538;179599537 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs949151920 | None | None | N | 0.351 | 0.162 | 0.533759884177 | gnomAD-4.0.0 | 1.5913E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02407E-05 |
I/V | rs2081160150 | None | None | N | 0.127 | 0.107 | 0.233785782151 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2389 | likely_benign | 0.24 | benign | -2.564 | Highly Destabilizing | 0.007 | N | 0.499 | neutral | None | None | None | None | N |
I/C | 0.5779 | likely_pathogenic | 0.6242 | pathogenic | -1.608 | Destabilizing | 0.356 | N | 0.613 | neutral | None | None | None | None | N |
I/D | 0.6674 | likely_pathogenic | 0.6292 | pathogenic | -3.092 | Highly Destabilizing | 0.136 | N | 0.678 | prob.neutral | None | None | None | None | N |
I/E | 0.5329 | ambiguous | 0.4772 | ambiguous | -2.884 | Highly Destabilizing | 0.136 | N | 0.632 | neutral | None | None | None | None | N |
I/F | 0.1202 | likely_benign | 0.1209 | benign | -1.537 | Destabilizing | 0.072 | N | 0.579 | neutral | None | None | None | None | N |
I/G | 0.5196 | ambiguous | 0.5276 | ambiguous | -3.061 | Highly Destabilizing | 0.136 | N | 0.629 | neutral | None | None | None | None | N |
I/H | 0.3877 | ambiguous | 0.3911 | ambiguous | -2.658 | Highly Destabilizing | 0.864 | D | 0.635 | neutral | None | None | None | None | N |
I/K | 0.3521 | ambiguous | 0.3227 | benign | -1.905 | Destabilizing | 0.055 | N | 0.653 | neutral | N | 0.462835306 | None | None | N |
I/L | 0.1075 | likely_benign | 0.1127 | benign | -1.113 | Destabilizing | 0.002 | N | 0.357 | neutral | N | 0.464647879 | None | None | N |
I/M | 0.0946 | likely_benign | 0.0949 | benign | -0.934 | Destabilizing | 0.171 | N | 0.573 | neutral | N | 0.49465076 | None | None | N |
I/N | 0.2246 | likely_benign | 0.2177 | benign | -2.207 | Highly Destabilizing | 0.356 | N | 0.677 | prob.neutral | None | None | None | None | N |
I/P | 0.9569 | likely_pathogenic | 0.9597 | pathogenic | -1.582 | Destabilizing | 0.356 | N | 0.677 | prob.neutral | None | None | None | None | N |
I/Q | 0.3765 | ambiguous | 0.3584 | ambiguous | -2.082 | Highly Destabilizing | 0.628 | D | 0.649 | neutral | None | None | None | None | N |
I/R | 0.2641 | likely_benign | 0.2473 | benign | -1.619 | Destabilizing | 0.295 | N | 0.669 | neutral | N | 0.430537488 | None | None | N |
I/S | 0.1932 | likely_benign | 0.1883 | benign | -2.79 | Highly Destabilizing | 0.016 | N | 0.572 | neutral | None | None | None | None | N |
I/T | 0.1532 | likely_benign | 0.1435 | benign | -2.462 | Highly Destabilizing | None | N | 0.351 | neutral | N | 0.372224668 | None | None | N |
I/V | 0.0548 | likely_benign | 0.0549 | benign | -1.582 | Destabilizing | None | N | 0.127 | neutral | N | 0.351703795 | None | None | N |
I/W | 0.7307 | likely_pathogenic | 0.7195 | pathogenic | -2.049 | Highly Destabilizing | 0.864 | D | 0.656 | neutral | None | None | None | None | N |
I/Y | 0.3962 | ambiguous | 0.3954 | ambiguous | -1.786 | Destabilizing | 0.356 | N | 0.652 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.