Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5040 | 15343;15344;15345 | chr2:178734806;178734805;178734804 | chr2:179599533;179599532;179599531 |
N2AB | 4723 | 14392;14393;14394 | chr2:178734806;178734805;178734804 | chr2:179599533;179599532;179599531 |
N2A | 3796 | 11611;11612;11613 | chr2:178734806;178734805;178734804 | chr2:179599533;179599532;179599531 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs1315700657 | None | 0.811 | N | 0.573 | 0.33 | 0.32714864917 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
D/H | None | None | 0.984 | N | 0.657 | 0.341 | 0.3085936734 | gnomAD-4.0.0 | 1.36843E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79896E-06 | 0 | 0 |
D/Y | None | None | 0.995 | N | 0.722 | 0.414 | 0.604632981478 | gnomAD-4.0.0 | 1.36843E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.03981E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3182 | likely_benign | 0.2688 | benign | -0.227 | Destabilizing | 0.896 | D | 0.611 | neutral | N | 0.476770284 | None | None | N |
D/C | 0.804 | likely_pathogenic | 0.742 | pathogenic | -0.054 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
D/E | 0.2113 | likely_benign | 0.1746 | benign | -0.635 | Destabilizing | 0.046 | N | 0.201 | neutral | N | 0.365077199 | None | None | N |
D/F | 0.6982 | likely_pathogenic | 0.6365 | pathogenic | 0.253 | Stabilizing | 0.996 | D | 0.718 | prob.delet. | None | None | None | None | N |
D/G | 0.4449 | ambiguous | 0.3649 | ambiguous | -0.683 | Destabilizing | 0.811 | D | 0.573 | neutral | N | 0.504105685 | None | None | N |
D/H | 0.3755 | ambiguous | 0.3071 | benign | -0.123 | Destabilizing | 0.984 | D | 0.657 | neutral | N | 0.452462347 | None | None | N |
D/I | 0.4644 | ambiguous | 0.4121 | ambiguous | 1.014 | Stabilizing | 0.988 | D | 0.723 | prob.delet. | None | None | None | None | N |
D/K | 0.7119 | likely_pathogenic | 0.5838 | pathogenic | -0.49 | Destabilizing | 0.919 | D | 0.569 | neutral | None | None | None | None | N |
D/L | 0.526 | ambiguous | 0.47 | ambiguous | 1.014 | Stabilizing | 0.988 | D | 0.679 | prob.neutral | None | None | None | None | N |
D/M | 0.723 | likely_pathogenic | 0.6798 | pathogenic | 1.512 | Stabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
D/N | 0.1455 | likely_benign | 0.135 | benign | -0.98 | Destabilizing | 0.026 | N | 0.373 | neutral | N | 0.437854668 | None | None | N |
D/P | 0.9871 | likely_pathogenic | 0.9792 | pathogenic | 0.628 | Stabilizing | 0.996 | D | 0.631 | neutral | None | None | None | None | N |
D/Q | 0.5232 | ambiguous | 0.4369 | ambiguous | -0.657 | Destabilizing | 0.919 | D | 0.536 | neutral | None | None | None | None | N |
D/R | 0.7123 | likely_pathogenic | 0.5858 | pathogenic | -0.501 | Destabilizing | 0.976 | D | 0.645 | neutral | None | None | None | None | N |
D/S | 0.2213 | likely_benign | 0.1936 | benign | -1.433 | Destabilizing | 0.851 | D | 0.56 | neutral | None | None | None | None | N |
D/T | 0.4059 | ambiguous | 0.3497 | ambiguous | -1.022 | Destabilizing | 0.919 | D | 0.573 | neutral | None | None | None | None | N |
D/V | 0.2771 | likely_benign | 0.2474 | benign | 0.628 | Stabilizing | 0.984 | D | 0.681 | prob.neutral | N | 0.415064886 | None | None | N |
D/W | 0.9351 | likely_pathogenic | 0.9056 | pathogenic | 0.209 | Stabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
D/Y | 0.3189 | likely_benign | 0.2591 | benign | 0.478 | Stabilizing | 0.995 | D | 0.722 | prob.delet. | N | 0.488030214 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.