Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5042 | 15349;15350;15351 | chr2:178734800;178734799;178734798 | chr2:179599527;179599526;179599525 |
N2AB | 4725 | 14398;14399;14400 | chr2:178734800;178734799;178734798 | chr2:179599527;179599526;179599525 |
N2A | 3798 | 11617;11618;11619 | chr2:178734800;178734799;178734798 | chr2:179599527;179599526;179599525 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/M | rs1060500462 | None | 0.004 | N | 0.213 | 0.087 | 0.210429274316 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
T/M | rs1060500462 | None | 0.004 | N | 0.213 | 0.087 | 0.210429274316 | gnomAD-4.0.0 | 3.09861E-06 | None | None | None | None | N | None | 1.33518E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39047E-06 | 0 | 0 |
T/R | None | None | None | N | 0.145 | 0.264 | 0.168933306366 | gnomAD-4.0.0 | 6.84223E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99488E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0817 | likely_benign | 0.0744 | benign | -0.696 | Destabilizing | 0.005 | N | 0.183 | neutral | N | 0.501563446 | None | None | N |
T/C | 0.3822 | ambiguous | 0.35 | ambiguous | -0.346 | Destabilizing | 0.628 | D | 0.377 | neutral | None | None | None | None | N |
T/D | 0.3087 | likely_benign | 0.2668 | benign | -0.205 | Destabilizing | 0.072 | N | 0.437 | neutral | None | None | None | None | N |
T/E | 0.2477 | likely_benign | 0.2143 | benign | -0.262 | Destabilizing | 0.031 | N | 0.386 | neutral | None | None | None | None | N |
T/F | 0.203 | likely_benign | 0.1737 | benign | -1.126 | Destabilizing | 0.038 | N | 0.509 | neutral | None | None | None | None | N |
T/G | 0.2118 | likely_benign | 0.1853 | benign | -0.861 | Destabilizing | 0.016 | N | 0.411 | neutral | None | None | None | None | N |
T/H | 0.188 | likely_benign | 0.1687 | benign | -1.279 | Destabilizing | 0.628 | D | 0.457 | neutral | None | None | None | None | N |
T/I | 0.153 | likely_benign | 0.1289 | benign | -0.366 | Destabilizing | None | N | 0.137 | neutral | None | None | None | None | N |
T/K | 0.1481 | likely_benign | 0.1259 | benign | -0.511 | Destabilizing | 0.001 | N | 0.109 | neutral | N | 0.494389913 | None | None | N |
T/L | 0.0865 | likely_benign | 0.0777 | benign | -0.366 | Destabilizing | None | N | 0.095 | neutral | None | None | None | None | N |
T/M | 0.0824 | likely_benign | 0.0787 | benign | 0.116 | Stabilizing | 0.004 | N | 0.213 | neutral | N | 0.512068058 | None | None | N |
T/N | 0.1066 | likely_benign | 0.0946 | benign | -0.328 | Destabilizing | 0.072 | N | 0.266 | neutral | None | None | None | None | N |
T/P | 0.1566 | likely_benign | 0.1261 | benign | -0.447 | Destabilizing | 0.106 | N | 0.442 | neutral | N | 0.496047201 | None | None | N |
T/Q | 0.1829 | likely_benign | 0.1595 | benign | -0.65 | Destabilizing | 0.072 | N | 0.437 | neutral | None | None | None | None | N |
T/R | 0.1118 | likely_benign | 0.101 | benign | -0.213 | Destabilizing | None | N | 0.145 | neutral | N | 0.474812306 | None | None | N |
T/S | 0.0934 | likely_benign | 0.0856 | benign | -0.573 | Destabilizing | None | N | 0.082 | neutral | N | 0.448839391 | None | None | N |
T/V | 0.128 | likely_benign | 0.1092 | benign | -0.447 | Destabilizing | 0.007 | N | 0.18 | neutral | None | None | None | None | N |
T/W | 0.4433 | ambiguous | 0.391 | ambiguous | -1.043 | Destabilizing | 0.864 | D | 0.44 | neutral | None | None | None | None | N |
T/Y | 0.2418 | likely_benign | 0.2092 | benign | -0.785 | Destabilizing | 0.356 | N | 0.513 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.