Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5044 | 15355;15356;15357 | chr2:178734794;178734793;178734792 | chr2:179599521;179599520;179599519 |
N2AB | 4727 | 14404;14405;14406 | chr2:178734794;178734793;178734792 | chr2:179599521;179599520;179599519 |
N2A | 3800 | 11623;11624;11625 | chr2:178734794;178734793;178734792 | chr2:179599521;179599520;179599519 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.002 | N | 0.146 | 0.236 | 0.418964662724 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3475 | ambiguous | 0.3214 | benign | -1.775 | Destabilizing | 0.201 | N | 0.437 | neutral | N | 0.424407137 | None | None | N |
V/C | 0.8395 | likely_pathogenic | 0.844 | pathogenic | -1.623 | Destabilizing | 0.992 | D | 0.591 | neutral | None | None | None | None | N |
V/D | 0.9581 | likely_pathogenic | 0.952 | pathogenic | -2.473 | Highly Destabilizing | 0.85 | D | 0.646 | neutral | None | None | None | None | N |
V/E | 0.922 | likely_pathogenic | 0.9144 | pathogenic | -2.433 | Highly Destabilizing | 0.549 | D | 0.613 | neutral | D | 0.596121865 | None | None | N |
V/F | 0.5348 | ambiguous | 0.5122 | ambiguous | -1.412 | Destabilizing | 0.739 | D | 0.633 | neutral | None | None | None | None | N |
V/G | 0.5715 | likely_pathogenic | 0.5262 | ambiguous | -2.129 | Highly Destabilizing | 0.549 | D | 0.605 | neutral | D | 0.596121865 | None | None | N |
V/H | 0.9758 | likely_pathogenic | 0.9727 | pathogenic | -1.672 | Destabilizing | 0.992 | D | 0.609 | neutral | None | None | None | None | N |
V/I | 0.1006 | likely_benign | 0.0941 | benign | -0.866 | Destabilizing | 0.201 | N | 0.453 | neutral | N | 0.476129844 | None | None | N |
V/K | 0.9499 | likely_pathogenic | 0.941 | pathogenic | -1.487 | Destabilizing | 0.617 | D | 0.574 | neutral | None | None | None | None | N |
V/L | 0.3071 | likely_benign | 0.2667 | benign | -0.866 | Destabilizing | 0.002 | N | 0.146 | neutral | N | 0.465218391 | None | None | N |
V/M | 0.1978 | likely_benign | 0.1835 | benign | -0.814 | Destabilizing | 0.059 | N | 0.349 | neutral | None | None | None | None | N |
V/N | 0.8611 | likely_pathogenic | 0.8489 | pathogenic | -1.508 | Destabilizing | 0.85 | D | 0.648 | neutral | None | None | None | None | N |
V/P | 0.9368 | likely_pathogenic | 0.8906 | pathogenic | -1.138 | Destabilizing | 0.92 | D | 0.629 | neutral | None | None | None | None | N |
V/Q | 0.9097 | likely_pathogenic | 0.9021 | pathogenic | -1.678 | Destabilizing | 0.92 | D | 0.625 | neutral | None | None | None | None | N |
V/R | 0.9255 | likely_pathogenic | 0.9175 | pathogenic | -0.996 | Destabilizing | 0.92 | D | 0.65 | neutral | None | None | None | None | N |
V/S | 0.6009 | likely_pathogenic | 0.576 | pathogenic | -2.001 | Highly Destabilizing | 0.059 | N | 0.451 | neutral | None | None | None | None | N |
V/T | 0.4213 | ambiguous | 0.4051 | ambiguous | -1.85 | Destabilizing | 0.447 | N | 0.487 | neutral | None | None | None | None | N |
V/W | 0.9805 | likely_pathogenic | 0.9793 | pathogenic | -1.685 | Destabilizing | 0.992 | D | 0.605 | neutral | None | None | None | None | N |
V/Y | 0.9437 | likely_pathogenic | 0.9417 | pathogenic | -1.37 | Destabilizing | 0.92 | D | 0.636 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.