Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5049 | 15370;15371;15372 | chr2:178734779;178734778;178734777 | chr2:179599506;179599505;179599504 |
N2AB | 4732 | 14419;14420;14421 | chr2:178734779;178734778;178734777 | chr2:179599506;179599505;179599504 |
N2A | 3805 | 11638;11639;11640 | chr2:178734779;178734778;178734777 | chr2:179599506;179599505;179599504 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.939 | N | 0.437 | 0.346 | 0.454518106513 | gnomAD-4.0.0 | 1.5913E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85838E-06 | 0 | 0 |
S/N | rs1314741857 | -0.438 | 0.939 | D | 0.491 | 0.26 | 0.429320821379 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
S/N | rs1314741857 | -0.438 | 0.939 | D | 0.491 | 0.26 | 0.429320821379 | gnomAD-4.0.0 | 4.77432E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.30046E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1196 | likely_benign | 0.1109 | benign | -0.79 | Destabilizing | 0.807 | D | 0.371 | neutral | None | None | None | None | N |
S/C | 0.2918 | likely_benign | 0.2589 | benign | -0.522 | Destabilizing | 0.999 | D | 0.759 | deleterious | D | 0.668875497 | None | None | N |
S/D | 0.8206 | likely_pathogenic | 0.7902 | pathogenic | -0.005 | Destabilizing | 0.953 | D | 0.49 | neutral | None | None | None | None | N |
S/E | 0.8402 | likely_pathogenic | 0.8102 | pathogenic | -0.006 | Destabilizing | 0.953 | D | 0.488 | neutral | None | None | None | None | N |
S/F | 0.6805 | likely_pathogenic | 0.6225 | pathogenic | -0.981 | Destabilizing | 0.993 | D | 0.829 | deleterious | None | None | None | None | N |
S/G | 0.1432 | likely_benign | 0.1147 | benign | -1.031 | Destabilizing | 0.939 | D | 0.437 | neutral | N | 0.513497879 | None | None | N |
S/H | 0.7952 | likely_pathogenic | 0.7417 | pathogenic | -1.471 | Destabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
S/I | 0.6107 | likely_pathogenic | 0.4908 | ambiguous | -0.255 | Destabilizing | 0.982 | D | 0.796 | deleterious | D | 0.636906446 | None | None | N |
S/K | 0.9227 | likely_pathogenic | 0.8974 | pathogenic | -0.586 | Destabilizing | 0.953 | D | 0.485 | neutral | None | None | None | None | N |
S/L | 0.2844 | likely_benign | 0.2556 | benign | -0.255 | Destabilizing | 0.91 | D | 0.61 | neutral | None | None | None | None | N |
S/M | 0.4509 | ambiguous | 0.3965 | ambiguous | -0.008 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
S/N | 0.4175 | ambiguous | 0.347 | ambiguous | -0.534 | Destabilizing | 0.939 | D | 0.491 | neutral | D | 0.566565108 | None | None | N |
S/P | 0.9289 | likely_pathogenic | 0.9184 | pathogenic | -0.4 | Destabilizing | 0.993 | D | 0.757 | deleterious | None | None | None | None | N |
S/Q | 0.8292 | likely_pathogenic | 0.7794 | pathogenic | -0.686 | Destabilizing | 0.993 | D | 0.648 | neutral | None | None | None | None | N |
S/R | 0.8666 | likely_pathogenic | 0.8126 | pathogenic | -0.513 | Destabilizing | 0.991 | D | 0.775 | deleterious | D | 0.578555302 | None | None | N |
S/T | 0.1353 | likely_benign | 0.1408 | benign | -0.607 | Destabilizing | 0.17 | N | 0.364 | neutral | N | 0.512190895 | None | None | N |
S/V | 0.5769 | likely_pathogenic | 0.4903 | ambiguous | -0.4 | Destabilizing | 0.973 | D | 0.69 | prob.neutral | None | None | None | None | N |
S/W | 0.8311 | likely_pathogenic | 0.799 | pathogenic | -0.925 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
S/Y | 0.6248 | likely_pathogenic | 0.5862 | pathogenic | -0.665 | Destabilizing | 0.998 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.