Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5053 | 15382;15383;15384 | chr2:178734767;178734766;178734765 | chr2:179599494;179599493;179599492 |
N2AB | 4736 | 14431;14432;14433 | chr2:178734767;178734766;178734765 | chr2:179599494;179599493;179599492 |
N2A | 3809 | 11650;11651;11652 | chr2:178734767;178734766;178734765 | chr2:179599494;179599493;179599492 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.811 | N | 0.632 | 0.252 | 0.529611391303 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
S/P | None | None | 0.984 | N | 0.617 | 0.302 | 0.258779203287 | gnomAD-4.0.0 | 1.59179E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8592E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1021 | likely_benign | 0.0995 | benign | -0.967 | Destabilizing | 0.64 | D | 0.481 | neutral | N | 0.449939669 | None | None | N |
S/C | 0.1352 | likely_benign | 0.1291 | benign | -0.538 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | N |
S/D | 0.7495 | likely_pathogenic | 0.7011 | pathogenic | -0.689 | Destabilizing | 0.919 | D | 0.567 | neutral | None | None | None | None | N |
S/E | 0.775 | likely_pathogenic | 0.738 | pathogenic | -0.533 | Destabilizing | 0.919 | D | 0.569 | neutral | None | None | None | None | N |
S/F | 0.1813 | likely_benign | 0.1715 | benign | -0.999 | Destabilizing | 0.988 | D | 0.69 | prob.neutral | None | None | None | None | N |
S/G | 0.1723 | likely_benign | 0.1644 | benign | -1.325 | Destabilizing | 0.919 | D | 0.593 | neutral | None | None | None | None | N |
S/H | 0.421 | ambiguous | 0.3781 | ambiguous | -1.58 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
S/I | 0.1464 | likely_benign | 0.1384 | benign | -0.065 | Destabilizing | 0.976 | D | 0.629 | neutral | None | None | None | None | N |
S/K | 0.8577 | likely_pathogenic | 0.7891 | pathogenic | 0.096 | Stabilizing | 0.919 | D | 0.568 | neutral | None | None | None | None | N |
S/L | 0.1086 | likely_benign | 0.1014 | benign | -0.065 | Destabilizing | 0.811 | D | 0.632 | neutral | N | 0.447708667 | None | None | N |
S/M | 0.2156 | likely_benign | 0.208 | benign | -0.033 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
S/N | 0.242 | likely_benign | 0.2194 | benign | -0.409 | Destabilizing | 0.919 | D | 0.581 | neutral | None | None | None | None | N |
S/P | 0.9803 | likely_pathogenic | 0.977 | pathogenic | -0.333 | Destabilizing | 0.984 | D | 0.617 | neutral | N | 0.436207575 | None | None | N |
S/Q | 0.6226 | likely_pathogenic | 0.5862 | pathogenic | -0.306 | Destabilizing | 0.988 | D | 0.565 | neutral | None | None | None | None | N |
S/R | 0.734 | likely_pathogenic | 0.6327 | pathogenic | -0.198 | Destabilizing | 0.988 | D | 0.617 | neutral | None | None | None | None | N |
S/T | 0.0749 | likely_benign | 0.0711 | benign | -0.278 | Destabilizing | 0.016 | N | 0.337 | neutral | N | 0.3328232 | None | None | N |
S/V | 0.1656 | likely_benign | 0.1524 | benign | -0.333 | Destabilizing | 0.851 | D | 0.623 | neutral | None | None | None | None | N |
S/W | 0.4467 | ambiguous | 0.4126 | ambiguous | -1.052 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
S/Y | 0.2119 | likely_benign | 0.1888 | benign | -0.66 | Destabilizing | 0.996 | D | 0.696 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.