Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5055 | 15388;15389;15390 | chr2:178734761;178734760;178734759 | chr2:179599488;179599487;179599486 |
N2AB | 4738 | 14437;14438;14439 | chr2:178734761;178734760;178734759 | chr2:179599488;179599487;179599486 |
N2A | 3811 | 11656;11657;11658 | chr2:178734761;178734760;178734759 | chr2:179599488;179599487;179599486 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.999 | D | 0.578 | 0.294 | 0.336892272479 | gnomAD-4.0.0 | 1.59185E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43373E-05 | 0 |
E/G | rs1185775947 | None | 1.0 | D | 0.81 | 0.595 | 0.631273993836 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs1185775947 | None | 1.0 | D | 0.81 | 0.595 | 0.631273993836 | gnomAD-4.0.0 | 6.57004E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4699E-05 | 0 | 0 |
E/K | None | None | 0.999 | N | 0.663 | 0.369 | 0.450152462452 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3932 | ambiguous | 0.3324 | benign | -1.181 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | D | 0.612462179 | None | None | N |
E/C | 0.967 | likely_pathogenic | 0.9517 | pathogenic | -0.49 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
E/D | 0.4931 | ambiguous | 0.4086 | ambiguous | -0.972 | Destabilizing | 0.999 | D | 0.578 | neutral | D | 0.603915509 | None | None | N |
E/F | 0.8878 | likely_pathogenic | 0.8551 | pathogenic | -0.714 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
E/G | 0.6174 | likely_pathogenic | 0.5335 | ambiguous | -1.52 | Destabilizing | 1.0 | D | 0.81 | deleterious | D | 0.66799065 | None | None | N |
E/H | 0.6985 | likely_pathogenic | 0.6129 | pathogenic | -0.931 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/I | 0.4707 | ambiguous | 0.4251 | ambiguous | -0.253 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
E/K | 0.2156 | likely_benign | 0.1677 | benign | -0.405 | Destabilizing | 0.999 | D | 0.663 | neutral | N | 0.498769629 | None | None | N |
E/L | 0.5829 | likely_pathogenic | 0.5214 | ambiguous | -0.253 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
E/M | 0.5638 | ambiguous | 0.5207 | ambiguous | 0.285 | Stabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
E/N | 0.6361 | likely_pathogenic | 0.5392 | ambiguous | -0.89 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/P | 0.9964 | likely_pathogenic | 0.9947 | pathogenic | -0.543 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
E/Q | 0.2064 | likely_benign | 0.1665 | benign | -0.801 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.506825913 | None | None | N |
E/R | 0.4118 | ambiguous | 0.3417 | ambiguous | -0.222 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
E/S | 0.4991 | ambiguous | 0.4212 | ambiguous | -1.234 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | N |
E/T | 0.4153 | ambiguous | 0.3479 | ambiguous | -0.933 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
E/V | 0.2974 | likely_benign | 0.2562 | benign | -0.543 | Destabilizing | 1.0 | D | 0.854 | deleterious | N | 0.487148192 | None | None | N |
E/W | 0.9744 | likely_pathogenic | 0.9679 | pathogenic | -0.379 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
E/Y | 0.8591 | likely_pathogenic | 0.8035 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.