Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5068 | 15427;15428;15429 | chr2:178734722;178734721;178734720 | chr2:179599449;179599448;179599447 |
N2AB | 4751 | 14476;14477;14478 | chr2:178734722;178734721;178734720 | chr2:179599449;179599448;179599447 |
N2A | 3824 | 11695;11696;11697 | chr2:178734722;178734721;178734720 | chr2:179599449;179599448;179599447 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.92 | N | 0.555 | 0.404 | 0.580704020645 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.221 | likely_benign | 0.2035 | benign | -1.14 | Destabilizing | 0.134 | N | 0.201 | neutral | N | 0.476377625 | None | None | N |
E/C | 0.9171 | likely_pathogenic | 0.9155 | pathogenic | -0.347 | Destabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | N |
E/D | 0.1228 | likely_benign | 0.1211 | benign | -0.843 | Destabilizing | 0.92 | D | 0.451 | neutral | N | 0.510428671 | None | None | N |
E/F | 0.8393 | likely_pathogenic | 0.838 | pathogenic | -0.964 | Destabilizing | 0.982 | D | 0.604 | neutral | None | None | None | None | N |
E/G | 0.2599 | likely_benign | 0.2438 | benign | -1.419 | Destabilizing | 0.92 | D | 0.555 | neutral | N | 0.511487369 | None | None | N |
E/H | 0.5114 | ambiguous | 0.4868 | ambiguous | -1.139 | Destabilizing | 0.991 | D | 0.566 | neutral | None | None | None | None | N |
E/I | 0.485 | ambiguous | 0.4936 | ambiguous | -0.39 | Destabilizing | 0.884 | D | 0.6 | neutral | None | None | None | None | N |
E/K | 0.1743 | likely_benign | 0.1575 | benign | -0.206 | Destabilizing | 0.852 | D | 0.479 | neutral | N | 0.464473899 | None | None | N |
E/L | 0.5517 | ambiguous | 0.5357 | ambiguous | -0.39 | Destabilizing | 0.02 | N | 0.328 | neutral | None | None | None | None | N |
E/M | 0.5514 | ambiguous | 0.5509 | ambiguous | 0.181 | Stabilizing | 0.982 | D | 0.588 | neutral | None | None | None | None | N |
E/N | 0.2415 | likely_benign | 0.2372 | benign | -0.64 | Destabilizing | 0.991 | D | 0.559 | neutral | None | None | None | None | N |
E/P | 0.8584 | likely_pathogenic | 0.8167 | pathogenic | -0.622 | Destabilizing | 0.991 | D | 0.61 | neutral | None | None | None | None | N |
E/Q | 0.1604 | likely_benign | 0.1444 | benign | -0.585 | Destabilizing | 0.31 | N | 0.252 | neutral | N | 0.48736129 | None | None | N |
E/R | 0.3263 | likely_benign | 0.2933 | benign | -0.132 | Destabilizing | 0.939 | D | 0.548 | neutral | None | None | None | None | N |
E/S | 0.2335 | likely_benign | 0.2251 | benign | -0.913 | Destabilizing | 0.884 | D | 0.478 | neutral | None | None | None | None | N |
E/T | 0.2534 | likely_benign | 0.2442 | benign | -0.66 | Destabilizing | 0.939 | D | 0.554 | neutral | None | None | None | None | N |
E/V | 0.2877 | likely_benign | 0.283 | benign | -0.622 | Destabilizing | 0.852 | D | 0.533 | neutral | N | 0.491967225 | None | None | N |
E/W | 0.939 | likely_pathogenic | 0.9358 | pathogenic | -0.702 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | N |
E/Y | 0.7188 | likely_pathogenic | 0.7115 | pathogenic | -0.684 | Destabilizing | 0.997 | D | 0.599 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.