Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5077 | 15454;15455;15456 | chr2:178734595;178734594;178734593 | chr2:179599322;179599321;179599320 |
N2AB | 4760 | 14503;14504;14505 | chr2:178734595;178734594;178734593 | chr2:179599322;179599321;179599320 |
N2A | 3833 | 11722;11723;11724 | chr2:178734595;178734594;178734593 | chr2:179599322;179599321;179599320 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs777568519 | -1.672 | 0.817 | D | 0.537 | 0.637 | 0.536240654335 | gnomAD-2.1.1 | 4.72E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.93E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9811 | likely_pathogenic | 0.9707 | pathogenic | -2.709 | Highly Destabilizing | 0.993 | D | 0.775 | deleterious | None | None | None | None | N |
F/C | 0.9265 | likely_pathogenic | 0.8941 | pathogenic | -1.64 | Destabilizing | 1.0 | D | 0.877 | deleterious | D | 0.791099572 | None | None | N |
F/D | 0.998 | likely_pathogenic | 0.9977 | pathogenic | -2.109 | Highly Destabilizing | 0.999 | D | 0.88 | deleterious | None | None | None | None | N |
F/E | 0.9976 | likely_pathogenic | 0.9969 | pathogenic | -2.035 | Highly Destabilizing | 0.999 | D | 0.876 | deleterious | None | None | None | None | N |
F/G | 0.9952 | likely_pathogenic | 0.9922 | pathogenic | -3.041 | Highly Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
F/H | 0.9815 | likely_pathogenic | 0.9784 | pathogenic | -1.32 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
F/I | 0.5333 | ambiguous | 0.4373 | ambiguous | -1.688 | Destabilizing | 0.219 | N | 0.315 | neutral | N | 0.516753199 | None | None | N |
F/K | 0.9971 | likely_pathogenic | 0.9961 | pathogenic | -1.471 | Destabilizing | 0.999 | D | 0.88 | deleterious | None | None | None | None | N |
F/L | 0.9392 | likely_pathogenic | 0.9145 | pathogenic | -1.688 | Destabilizing | 0.817 | D | 0.537 | neutral | D | 0.681407363 | None | None | N |
F/M | 0.8435 | likely_pathogenic | 0.7838 | pathogenic | -1.398 | Destabilizing | 0.998 | D | 0.728 | prob.delet. | None | None | None | None | N |
F/N | 0.9905 | likely_pathogenic | 0.9882 | pathogenic | -1.481 | Destabilizing | 0.999 | D | 0.892 | deleterious | None | None | None | None | N |
F/P | 0.9953 | likely_pathogenic | 0.9948 | pathogenic | -2.026 | Highly Destabilizing | 0.999 | D | 0.892 | deleterious | None | None | None | None | N |
F/Q | 0.995 | likely_pathogenic | 0.9933 | pathogenic | -1.698 | Destabilizing | 0.999 | D | 0.901 | deleterious | None | None | None | None | N |
F/R | 0.9914 | likely_pathogenic | 0.9899 | pathogenic | -0.671 | Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
F/S | 0.9848 | likely_pathogenic | 0.9779 | pathogenic | -2.259 | Highly Destabilizing | 0.999 | D | 0.849 | deleterious | D | 0.790689058 | None | None | N |
F/T | 0.9847 | likely_pathogenic | 0.976 | pathogenic | -2.092 | Highly Destabilizing | 0.993 | D | 0.851 | deleterious | None | None | None | None | N |
F/V | 0.6287 | likely_pathogenic | 0.5156 | ambiguous | -2.026 | Highly Destabilizing | 0.911 | D | 0.643 | neutral | D | 0.641533513 | None | None | N |
F/W | 0.8996 | likely_pathogenic | 0.8912 | pathogenic | -0.827 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
F/Y | 0.6444 | likely_pathogenic | 0.6104 | pathogenic | -1.008 | Destabilizing | 0.997 | D | 0.667 | neutral | D | 0.733559183 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.