Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5079 | 15460;15461;15462 | chr2:178734589;178734588;178734587 | chr2:179599316;179599315;179599314 |
N2AB | 4762 | 14509;14510;14511 | chr2:178734589;178734588;178734587 | chr2:179599316;179599315;179599314 |
N2A | 3835 | 11728;11729;11730 | chr2:178734589;178734588;178734587 | chr2:179599316;179599315;179599314 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1327420984 | None | 0.124 | D | 0.457 | 0.189 | 0.29132392195 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/E | rs1327420984 | None | 0.124 | D | 0.457 | 0.189 | 0.29132392195 | gnomAD-4.0.0 | 6.57056E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46998E-05 | 0 | 0 |
K/R | None | None | 0.001 | N | 0.174 | 0.066 | 0.178374595973 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.381 | ambiguous | 0.3572 | ambiguous | -0.399 | Destabilizing | 0.272 | N | 0.445 | neutral | None | None | None | None | I |
K/C | 0.6576 | likely_pathogenic | 0.6565 | pathogenic | -0.389 | Destabilizing | 0.968 | D | 0.638 | neutral | None | None | None | None | I |
K/D | 0.6075 | likely_pathogenic | 0.5535 | ambiguous | -0.036 | Destabilizing | 0.396 | N | 0.414 | neutral | None | None | None | None | I |
K/E | 0.1792 | likely_benign | 0.168 | benign | 0.068 | Stabilizing | 0.124 | N | 0.457 | neutral | D | 0.560652647 | None | None | I |
K/F | 0.8092 | likely_pathogenic | 0.7944 | pathogenic | 0.025 | Stabilizing | 0.726 | D | 0.599 | neutral | None | None | None | None | I |
K/G | 0.4364 | ambiguous | 0.4078 | ambiguous | -0.766 | Destabilizing | 0.272 | N | 0.473 | neutral | None | None | None | None | I |
K/H | 0.2537 | likely_benign | 0.2266 | benign | -1.056 | Destabilizing | 0.726 | D | 0.485 | neutral | None | None | None | None | I |
K/I | 0.4819 | ambiguous | 0.4772 | ambiguous | 0.547 | Stabilizing | 0.667 | D | 0.607 | neutral | D | 0.561832602 | None | None | I |
K/L | 0.4315 | ambiguous | 0.4125 | ambiguous | 0.547 | Stabilizing | 0.272 | N | 0.447 | neutral | None | None | None | None | I |
K/M | 0.3166 | likely_benign | 0.2957 | benign | 0.32 | Stabilizing | 0.968 | D | 0.496 | neutral | None | None | None | None | I |
K/N | 0.4076 | ambiguous | 0.3522 | ambiguous | -0.328 | Destabilizing | 0.009 | N | 0.176 | neutral | N | 0.509387618 | None | None | I |
K/P | 0.9145 | likely_pathogenic | 0.9068 | pathogenic | 0.262 | Stabilizing | 0.726 | D | 0.466 | neutral | None | None | None | None | I |
K/Q | 0.1148 | likely_benign | 0.1055 | benign | -0.373 | Destabilizing | 0.497 | N | 0.424 | neutral | N | 0.486659458 | None | None | I |
K/R | 0.0686 | likely_benign | 0.0709 | benign | -0.619 | Destabilizing | 0.001 | N | 0.174 | neutral | N | 0.484484248 | None | None | I |
K/S | 0.3857 | ambiguous | 0.3408 | ambiguous | -0.928 | Destabilizing | 0.272 | N | 0.399 | neutral | None | None | None | None | I |
K/T | 0.2019 | likely_benign | 0.1759 | benign | -0.626 | Destabilizing | 0.22 | N | 0.426 | neutral | N | 0.50662802 | None | None | I |
K/V | 0.4168 | ambiguous | 0.4079 | ambiguous | 0.262 | Stabilizing | 0.567 | D | 0.55 | neutral | None | None | None | None | I |
K/W | 0.7123 | likely_pathogenic | 0.7196 | pathogenic | 0.123 | Stabilizing | 0.968 | D | 0.66 | neutral | None | None | None | None | I |
K/Y | 0.6313 | likely_pathogenic | 0.6245 | pathogenic | 0.377 | Stabilizing | 0.726 | D | 0.569 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.