Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5085 | 15478;15479;15480 | chr2:178734571;178734570;178734569 | chr2:179599298;179599297;179599296 |
N2AB | 4768 | 14527;14528;14529 | chr2:178734571;178734570;178734569 | chr2:179599298;179599297;179599296 |
N2A | 3841 | 11746;11747;11748 | chr2:178734571;178734570;178734569 | chr2:179599298;179599297;179599296 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.324 | N | 0.346 | 0.293 | 0.253205268125 | gnomAD-4.0.0 | 1.3937E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.82085E-06 | 0 | 0 |
D/N | rs374299783 | 0.406 | 0.324 | N | 0.342 | 0.108 | None | gnomAD-2.1.1 | 8.76E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.9E-05 | 0 |
D/N | rs374299783 | 0.406 | 0.324 | N | 0.342 | 0.108 | None | gnomAD-3.1.2 | 4.6E-05 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 8.82E-05 | 0 | 0 |
D/N | rs374299783 | 0.406 | 0.324 | N | 0.342 | 0.108 | None | gnomAD-4.0.0 | 5.29193E-05 | None | None | None | None | I | None | 1.35168E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 6.94455E-05 | 0 | 3.26115E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1867 | likely_benign | 0.1405 | benign | -0.052 | Destabilizing | 0.09 | N | 0.353 | neutral | N | 0.483582931 | None | None | I |
D/C | 0.7041 | likely_pathogenic | 0.5973 | pathogenic | -0.103 | Destabilizing | 0.981 | D | 0.435 | neutral | None | None | None | None | I |
D/E | 0.1627 | likely_benign | 0.1237 | benign | -0.301 | Destabilizing | None | N | 0.149 | neutral | N | 0.363555349 | None | None | I |
D/F | 0.6185 | likely_pathogenic | 0.5159 | ambiguous | -0.039 | Destabilizing | 0.818 | D | 0.424 | neutral | None | None | None | None | I |
D/G | 0.2272 | likely_benign | 0.1693 | benign | -0.205 | Destabilizing | 0.324 | N | 0.346 | neutral | N | 0.484154861 | None | None | I |
D/H | 0.3271 | likely_benign | 0.2654 | benign | 0.443 | Stabilizing | 0.001 | N | 0.248 | neutral | N | 0.500274243 | None | None | I |
D/I | 0.4197 | ambiguous | 0.2938 | benign | 0.292 | Stabilizing | 0.818 | D | 0.427 | neutral | None | None | None | None | I |
D/K | 0.5045 | ambiguous | 0.3474 | ambiguous | 0.417 | Stabilizing | 0.241 | N | 0.339 | neutral | None | None | None | None | I |
D/L | 0.434 | ambiguous | 0.3405 | ambiguous | 0.292 | Stabilizing | 0.388 | N | 0.441 | neutral | None | None | None | None | I |
D/M | 0.6485 | likely_pathogenic | 0.523 | ambiguous | 0.143 | Stabilizing | 0.981 | D | 0.402 | neutral | None | None | None | None | I |
D/N | 0.1001 | likely_benign | 0.087 | benign | 0.091 | Stabilizing | 0.324 | N | 0.342 | neutral | N | 0.484814305 | None | None | I |
D/P | 0.7607 | likely_pathogenic | 0.6374 | pathogenic | 0.199 | Stabilizing | 0.818 | D | 0.385 | neutral | None | None | None | None | I |
D/Q | 0.3942 | ambiguous | 0.2884 | benign | 0.116 | Stabilizing | 0.241 | N | 0.301 | neutral | None | None | None | None | I |
D/R | 0.5332 | ambiguous | 0.3843 | ambiguous | 0.665 | Stabilizing | 0.388 | N | 0.416 | neutral | None | None | None | None | I |
D/S | 0.1367 | likely_benign | 0.1085 | benign | 0.012 | Stabilizing | 0.116 | N | 0.295 | neutral | None | None | None | None | I |
D/T | 0.2856 | likely_benign | 0.1987 | benign | 0.137 | Stabilizing | 0.388 | N | 0.364 | neutral | None | None | None | None | I |
D/V | 0.2384 | likely_benign | 0.1671 | benign | 0.199 | Stabilizing | 0.324 | N | 0.443 | neutral | N | 0.460146082 | None | None | I |
D/W | 0.9178 | likely_pathogenic | 0.8648 | pathogenic | 0.042 | Stabilizing | 0.981 | D | 0.499 | neutral | None | None | None | None | I |
D/Y | 0.2676 | likely_benign | 0.2121 | benign | 0.195 | Stabilizing | 0.457 | N | 0.434 | neutral | N | 0.498357913 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.