Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5086 | 15481;15482;15483 | chr2:178734568;178734567;178734566 | chr2:179599295;179599294;179599293 |
N2AB | 4769 | 14530;14531;14532 | chr2:178734568;178734567;178734566 | chr2:179599295;179599294;179599293 |
N2A | 3842 | 11749;11750;11751 | chr2:178734568;178734567;178734566 | chr2:179599295;179599294;179599293 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs938020572 | None | None | N | 0.225 | 0.302 | 0.58162856405 | gnomAD-4.0.0 | 3.2832E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.8948E-06 | 0 | 0 |
I/V | rs1560838962 | None | None | N | 0.133 | 0.092 | 0.384086055536 | gnomAD-2.1.1 | 4.27E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.78E-05 | None | 0 | 0 | 0 |
I/V | rs1560838962 | None | None | N | 0.133 | 0.092 | 0.384086055536 | gnomAD-4.0.0 | 2.08059E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.08176E-07 | 2.42407E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3916 | ambiguous | 0.2562 | benign | -1.535 | Destabilizing | None | N | 0.207 | neutral | None | None | None | None | I |
I/C | 0.8522 | likely_pathogenic | 0.7483 | pathogenic | -0.776 | Destabilizing | 0.356 | N | 0.423 | neutral | None | None | None | None | I |
I/D | 0.9384 | likely_pathogenic | 0.8532 | pathogenic | -0.705 | Destabilizing | 0.136 | N | 0.562 | neutral | None | None | None | None | I |
I/E | 0.8549 | likely_pathogenic | 0.7293 | pathogenic | -0.701 | Destabilizing | 0.136 | N | 0.504 | neutral | None | None | None | None | I |
I/F | 0.3049 | likely_benign | 0.2198 | benign | -1.164 | Destabilizing | 0.072 | N | 0.434 | neutral | None | None | None | None | I |
I/G | 0.8691 | likely_pathogenic | 0.7164 | pathogenic | -1.857 | Destabilizing | 0.031 | N | 0.393 | neutral | None | None | None | None | I |
I/H | 0.8268 | likely_pathogenic | 0.6876 | pathogenic | -1.178 | Destabilizing | 0.628 | D | 0.487 | neutral | None | None | None | None | I |
I/K | 0.719 | likely_pathogenic | 0.5775 | pathogenic | -0.851 | Destabilizing | 0.106 | N | 0.499 | neutral | N | 0.518595915 | None | None | I |
I/L | 0.1956 | likely_benign | 0.1634 | benign | -0.725 | Destabilizing | None | N | 0.127 | neutral | N | 0.474603117 | None | None | I |
I/M | 0.1306 | likely_benign | 0.1094 | benign | -0.513 | Destabilizing | 0.171 | N | 0.431 | neutral | N | 0.5152954 | None | None | I |
I/N | 0.6775 | likely_pathogenic | 0.483 | ambiguous | -0.619 | Destabilizing | 0.356 | N | 0.58 | neutral | None | None | None | None | I |
I/P | 0.9562 | likely_pathogenic | 0.9053 | pathogenic | -0.963 | Destabilizing | 0.136 | N | 0.561 | neutral | None | None | None | None | I |
I/Q | 0.7917 | likely_pathogenic | 0.6323 | pathogenic | -0.764 | Destabilizing | 0.628 | D | 0.561 | neutral | None | None | None | None | I |
I/R | 0.6114 | likely_pathogenic | 0.455 | ambiguous | -0.366 | Destabilizing | 0.295 | N | 0.583 | neutral | N | 0.518421197 | None | None | I |
I/S | 0.5402 | ambiguous | 0.3628 | ambiguous | -1.25 | Destabilizing | 0.016 | N | 0.355 | neutral | None | None | None | None | I |
I/T | 0.19 | likely_benign | 0.1377 | benign | -1.12 | Destabilizing | None | N | 0.225 | neutral | N | 0.45519289 | None | None | I |
I/V | 0.0767 | likely_benign | 0.0662 | benign | -0.963 | Destabilizing | None | N | 0.133 | neutral | N | 0.353748106 | None | None | I |
I/W | 0.9237 | likely_pathogenic | 0.8736 | pathogenic | -1.251 | Destabilizing | 0.864 | D | 0.491 | neutral | None | None | None | None | I |
I/Y | 0.8124 | likely_pathogenic | 0.6977 | pathogenic | -0.999 | Destabilizing | 0.356 | N | 0.503 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.