Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5087 | 15484;15485;15486 | chr2:178734565;178734564;178734563 | chr2:179599292;179599291;179599290 |
N2AB | 4770 | 14533;14534;14535 | chr2:178734565;178734564;178734563 | chr2:179599292;179599291;179599290 |
N2A | 3843 | 11752;11753;11754 | chr2:178734565;178734564;178734563 | chr2:179599292;179599291;179599290 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs751652571 | -0.435 | 0.999 | N | 0.583 | 0.177 | 0.577502390439 | gnomAD-2.1.1 | 1.5E-05 | None | None | None | None | I | None | 4.21E-05 | 0 | None | 0 | 0 | None | 1.12124E-04 | None | 0 | 0 | 0 |
V/M | rs751652571 | -0.435 | 0.999 | N | 0.583 | 0.177 | 0.577502390439 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | rs751652571 | -0.435 | 0.999 | N | 0.583 | 0.177 | 0.577502390439 | gnomAD-4.0.0 | 4.38724E-06 | None | None | None | None | I | None | 1.34448E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.84041E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5302 | ambiguous | 0.2895 | benign | -0.417 | Destabilizing | 0.998 | D | 0.525 | neutral | N | 0.505910225 | None | None | I |
V/C | 0.9387 | likely_pathogenic | 0.8702 | pathogenic | -0.889 | Destabilizing | 1.0 | D | 0.594 | neutral | None | None | None | None | I |
V/D | 0.883 | likely_pathogenic | 0.6021 | pathogenic | -0.033 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | I |
V/E | 0.7297 | likely_pathogenic | 0.4387 | ambiguous | -0.127 | Destabilizing | 1.0 | D | 0.659 | neutral | N | 0.502497972 | None | None | I |
V/F | 0.4668 | ambiguous | 0.2593 | benign | -0.605 | Destabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | I |
V/G | 0.6359 | likely_pathogenic | 0.3371 | benign | -0.51 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | D | 0.570265623 | None | None | I |
V/H | 0.9258 | likely_pathogenic | 0.7711 | pathogenic | -0.005 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
V/I | 0.0931 | likely_benign | 0.0822 | benign | -0.31 | Destabilizing | 0.985 | D | 0.471 | neutral | None | None | None | None | I |
V/K | 0.792 | likely_pathogenic | 0.5268 | ambiguous | -0.408 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
V/L | 0.3329 | likely_benign | 0.2044 | benign | -0.31 | Destabilizing | 0.434 | N | 0.324 | neutral | N | 0.442817875 | None | None | I |
V/M | 0.344 | ambiguous | 0.1937 | benign | -0.591 | Destabilizing | 0.999 | D | 0.583 | neutral | N | 0.508497722 | None | None | I |
V/N | 0.7699 | likely_pathogenic | 0.4618 | ambiguous | -0.314 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | I |
V/P | 0.7387 | likely_pathogenic | 0.5295 | ambiguous | -0.316 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
V/Q | 0.7134 | likely_pathogenic | 0.4548 | ambiguous | -0.459 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
V/R | 0.7572 | likely_pathogenic | 0.4971 | ambiguous | 0.003 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
V/S | 0.6102 | likely_pathogenic | 0.3269 | benign | -0.691 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | I |
V/T | 0.4528 | ambiguous | 0.2417 | benign | -0.681 | Destabilizing | 0.998 | D | 0.567 | neutral | None | None | None | None | I |
V/W | 0.9692 | likely_pathogenic | 0.9073 | pathogenic | -0.67 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
V/Y | 0.9039 | likely_pathogenic | 0.7566 | pathogenic | -0.408 | Destabilizing | 1.0 | D | 0.592 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.