Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5102 | 15529;15530;15531 | chr2:178734520;178734519;178734518 | chr2:179599247;179599246;179599245 |
N2AB | 4785 | 14578;14579;14580 | chr2:178734520;178734519;178734518 | chr2:179599247;179599246;179599245 |
N2A | 3858 | 11797;11798;11799 | chr2:178734520;178734519;178734518 | chr2:179599247;179599246;179599245 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.999 | N | 0.714 | 0.5 | 0.716320526391 | gnomAD-4.0.0 | 1.59285E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86113E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0891 | likely_benign | 0.0954 | benign | -0.228 | Destabilizing | 0.406 | N | 0.295 | neutral | N | 0.406252825 | None | None | I |
G/C | 0.272 | likely_benign | 0.3269 | benign | -0.852 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | I |
G/D | 0.4234 | ambiguous | 0.4594 | ambiguous | -0.496 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | I |
G/E | 0.2809 | likely_benign | 0.3007 | benign | -0.643 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | N | 0.494968389 | None | None | I |
G/F | 0.5828 | likely_pathogenic | 0.6401 | pathogenic | -0.907 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
G/H | 0.5454 | ambiguous | 0.584 | pathogenic | -0.422 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
G/I | 0.2788 | likely_benign | 0.3209 | benign | -0.368 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | I |
G/K | 0.5346 | ambiguous | 0.5727 | pathogenic | -0.783 | Destabilizing | 0.998 | D | 0.72 | prob.delet. | None | None | None | None | I |
G/L | 0.3532 | ambiguous | 0.4125 | ambiguous | -0.368 | Destabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | I |
G/M | 0.4452 | ambiguous | 0.4988 | ambiguous | -0.594 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
G/N | 0.4646 | ambiguous | 0.5056 | ambiguous | -0.43 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
G/P | 0.3691 | ambiguous | 0.3812 | ambiguous | -0.29 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | I |
G/Q | 0.4045 | ambiguous | 0.4325 | ambiguous | -0.673 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
G/R | 0.4146 | ambiguous | 0.4339 | ambiguous | -0.38 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | N | 0.513630782 | None | None | I |
G/S | 0.1053 | likely_benign | 0.1096 | benign | -0.567 | Destabilizing | 0.988 | D | 0.63 | neutral | None | None | None | None | I |
G/T | 0.1834 | likely_benign | 0.2095 | benign | -0.644 | Destabilizing | 0.998 | D | 0.727 | prob.delet. | None | None | None | None | I |
G/V | 0.1814 | likely_benign | 0.2095 | benign | -0.29 | Destabilizing | 0.998 | D | 0.75 | deleterious | N | 0.495878608 | None | None | I |
G/W | 0.519 | ambiguous | 0.5628 | ambiguous | -1.075 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
G/Y | 0.4724 | ambiguous | 0.5353 | ambiguous | -0.728 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.