Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5105 | 15538;15539;15540 | chr2:178734511;178734510;178734509 | chr2:179599238;179599237;179599236 |
N2AB | 4788 | 14587;14588;14589 | chr2:178734511;178734510;178734509 | chr2:179599238;179599237;179599236 |
N2A | 3861 | 11806;11807;11808 | chr2:178734511;178734510;178734509 | chr2:179599238;179599237;179599236 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1374129248 | -0.324 | 0.977 | D | 0.689 | 0.544 | 0.534572409765 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
E/A | rs1374129248 | -0.324 | 0.977 | D | 0.689 | 0.544 | 0.534572409765 | gnomAD-4.0.0 | 1.59167E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85892E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2835 | likely_benign | 0.288 | benign | -0.332 | Destabilizing | 0.977 | D | 0.689 | prob.neutral | D | 0.561839785 | None | None | I |
E/C | 0.9033 | likely_pathogenic | 0.9179 | pathogenic | -0.202 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
E/D | 0.1175 | likely_benign | 0.1347 | benign | -0.446 | Destabilizing | 0.117 | N | 0.219 | neutral | N | 0.514072802 | None | None | I |
E/F | 0.853 | likely_pathogenic | 0.8677 | pathogenic | -0.032 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | I |
E/G | 0.3293 | likely_benign | 0.3546 | ambiguous | -0.562 | Destabilizing | 0.993 | D | 0.701 | prob.neutral | D | 0.631019504 | None | None | I |
E/H | 0.5346 | ambiguous | 0.5288 | ambiguous | 0.23 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
E/I | 0.4773 | ambiguous | 0.5038 | ambiguous | 0.248 | Stabilizing | 0.998 | D | 0.776 | deleterious | None | None | None | None | I |
E/K | 0.2948 | likely_benign | 0.2772 | benign | 0.268 | Stabilizing | 0.977 | D | 0.606 | neutral | N | 0.503232621 | None | None | I |
E/L | 0.5528 | ambiguous | 0.5689 | pathogenic | 0.248 | Stabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | I |
E/M | 0.626 | likely_pathogenic | 0.6348 | pathogenic | 0.209 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
E/N | 0.3003 | likely_benign | 0.3126 | benign | -0.206 | Destabilizing | 0.99 | D | 0.716 | prob.delet. | None | None | None | None | I |
E/P | 0.9416 | likely_pathogenic | 0.9494 | pathogenic | 0.075 | Stabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | I |
E/Q | 0.183 | likely_benign | 0.1782 | benign | -0.133 | Destabilizing | 0.997 | D | 0.661 | neutral | N | 0.489709061 | None | None | I |
E/R | 0.4416 | ambiguous | 0.4107 | ambiguous | 0.552 | Stabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | I |
E/S | 0.2716 | likely_benign | 0.2761 | benign | -0.346 | Destabilizing | 0.983 | D | 0.643 | neutral | None | None | None | None | I |
E/T | 0.3054 | likely_benign | 0.3091 | benign | -0.151 | Destabilizing | 0.998 | D | 0.742 | deleterious | None | None | None | None | I |
E/V | 0.3057 | likely_benign | 0.3099 | benign | 0.075 | Stabilizing | 0.997 | D | 0.763 | deleterious | D | 0.533399244 | None | None | I |
E/W | 0.947 | likely_pathogenic | 0.9541 | pathogenic | 0.157 | Stabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
E/Y | 0.7332 | likely_pathogenic | 0.7586 | pathogenic | 0.222 | Stabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.