Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5111 | 15556;15557;15558 | chr2:178734493;178734492;178734491 | chr2:179599220;179599219;179599218 |
N2AB | 4794 | 14605;14606;14607 | chr2:178734493;178734492;178734491 | chr2:179599220;179599219;179599218 |
N2A | 3867 | 11824;11825;11826 | chr2:178734493;178734492;178734491 | chr2:179599220;179599219;179599218 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.026 | D | 0.22 | 0.273 | 0.158396225186 | gnomAD-4.0.0 | 6.84257E-07 | None | None | None | None | N | None | 2.98757E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/G | None | None | 0.896 | D | 0.488 | 0.669 | 0.412587454835 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5602 | ambiguous | 0.6388 | pathogenic | -0.633 | Destabilizing | 0.896 | D | 0.557 | neutral | D | 0.696473539 | None | None | N |
D/C | 0.8957 | likely_pathogenic | 0.9259 | pathogenic | -0.36 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
D/E | 0.3171 | likely_benign | 0.391 | ambiguous | -0.495 | Destabilizing | 0.026 | N | 0.22 | neutral | D | 0.569902997 | None | None | N |
D/F | 0.9076 | likely_pathogenic | 0.9437 | pathogenic | -0.2 | Destabilizing | 0.996 | D | 0.613 | neutral | None | None | None | None | N |
D/G | 0.2203 | likely_benign | 0.2591 | benign | -0.933 | Destabilizing | 0.896 | D | 0.488 | neutral | D | 0.555650191 | None | None | N |
D/H | 0.7782 | likely_pathogenic | 0.8186 | pathogenic | -0.308 | Destabilizing | 0.984 | D | 0.468 | neutral | D | 0.707260753 | None | None | N |
D/I | 0.9023 | likely_pathogenic | 0.9409 | pathogenic | 0.148 | Stabilizing | 0.996 | D | 0.617 | neutral | None | None | None | None | N |
D/K | 0.8798 | likely_pathogenic | 0.9047 | pathogenic | -0.409 | Destabilizing | 0.851 | D | 0.491 | neutral | None | None | None | None | N |
D/L | 0.8197 | likely_pathogenic | 0.8857 | pathogenic | 0.148 | Stabilizing | 0.988 | D | 0.593 | neutral | None | None | None | None | N |
D/M | 0.9288 | likely_pathogenic | 0.9555 | pathogenic | 0.402 | Stabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | N |
D/N | 0.1722 | likely_benign | 0.1748 | benign | -0.776 | Destabilizing | 0.046 | N | 0.191 | neutral | N | 0.497169306 | None | None | N |
D/P | 0.9915 | likely_pathogenic | 0.995 | pathogenic | -0.089 | Destabilizing | 0.988 | D | 0.463 | neutral | None | None | None | None | N |
D/Q | 0.7684 | likely_pathogenic | 0.8233 | pathogenic | -0.663 | Destabilizing | 0.952 | D | 0.378 | neutral | None | None | None | None | N |
D/R | 0.8823 | likely_pathogenic | 0.9054 | pathogenic | -0.118 | Destabilizing | 0.976 | D | 0.536 | neutral | None | None | None | None | N |
D/S | 0.3835 | ambiguous | 0.4316 | ambiguous | -0.978 | Destabilizing | 0.919 | D | 0.459 | neutral | None | None | None | None | N |
D/T | 0.7932 | likely_pathogenic | 0.863 | pathogenic | -0.74 | Destabilizing | 0.919 | D | 0.503 | neutral | None | None | None | None | N |
D/V | 0.7568 | likely_pathogenic | 0.8272 | pathogenic | -0.089 | Destabilizing | 0.984 | D | 0.603 | neutral | D | 0.689080861 | None | None | N |
D/W | 0.9795 | likely_pathogenic | 0.986 | pathogenic | 0.025 | Stabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
D/Y | 0.6162 | likely_pathogenic | 0.6512 | pathogenic | 0.029 | Stabilizing | 0.995 | D | 0.617 | neutral | D | 0.735062655 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.