Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5112 | 15559;15560;15561 | chr2:178734490;178734489;178734488 | chr2:179599217;179599216;179599215 |
N2AB | 4795 | 14608;14609;14610 | chr2:178734490;178734489;178734488 | chr2:179599217;179599216;179599215 |
N2A | 3868 | 11827;11828;11829 | chr2:178734490;178734489;178734488 | chr2:179599217;179599216;179599215 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.999 | N | 0.681 | 0.358 | 0.32714864917 | gnomAD-4.0.0 | 4.77456E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.29997E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5733 | likely_pathogenic | 0.6421 | pathogenic | 0.041 | Stabilizing | 0.998 | D | 0.581 | neutral | None | None | None | None | I |
K/C | 0.781 | likely_pathogenic | 0.8339 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
K/D | 0.6389 | likely_pathogenic | 0.7026 | pathogenic | 0.034 | Stabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | I |
K/E | 0.2734 | likely_benign | 0.3211 | benign | 0.055 | Stabilizing | 0.996 | D | 0.595 | neutral | N | 0.482765252 | None | None | I |
K/F | 0.907 | likely_pathogenic | 0.9367 | pathogenic | -0.126 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | I |
K/G | 0.3437 | ambiguous | 0.3857 | ambiguous | -0.159 | Destabilizing | 1.0 | D | 0.564 | neutral | None | None | None | None | I |
K/H | 0.3444 | ambiguous | 0.3893 | ambiguous | -0.324 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | I |
K/I | 0.7832 | likely_pathogenic | 0.8328 | pathogenic | 0.494 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
K/L | 0.6394 | likely_pathogenic | 0.7073 | pathogenic | 0.494 | Stabilizing | 1.0 | D | 0.564 | neutral | None | None | None | None | I |
K/M | 0.4896 | ambiguous | 0.5578 | ambiguous | 0.101 | Stabilizing | 1.0 | D | 0.64 | neutral | D | 0.605456906 | None | None | I |
K/N | 0.4634 | ambiguous | 0.5321 | ambiguous | 0.189 | Stabilizing | 0.999 | D | 0.681 | prob.neutral | N | 0.467812705 | None | None | I |
K/P | 0.9086 | likely_pathogenic | 0.9244 | pathogenic | 0.371 | Stabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | I |
K/Q | 0.1498 | likely_benign | 0.1659 | benign | 0.075 | Stabilizing | 0.999 | D | 0.683 | prob.neutral | N | 0.519291441 | None | None | I |
K/R | 0.0747 | likely_benign | 0.0756 | benign | -0.003 | Destabilizing | 0.64 | D | 0.369 | neutral | N | 0.5094837 | None | None | I |
K/S | 0.4928 | ambiguous | 0.5537 | ambiguous | -0.253 | Destabilizing | 0.998 | D | 0.599 | neutral | None | None | None | None | I |
K/T | 0.4001 | ambiguous | 0.461 | ambiguous | -0.084 | Destabilizing | 0.999 | D | 0.626 | neutral | N | 0.521338364 | None | None | I |
K/V | 0.7304 | likely_pathogenic | 0.7878 | pathogenic | 0.371 | Stabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | I |
K/W | 0.8252 | likely_pathogenic | 0.8648 | pathogenic | -0.182 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
K/Y | 0.7853 | likely_pathogenic | 0.8339 | pathogenic | 0.168 | Stabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.