Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5122 | 15589;15590;15591 | chr2:178734460;178734459;178734458 | chr2:179599187;179599186;179599185 |
N2AB | 4805 | 14638;14639;14640 | chr2:178734460;178734459;178734458 | chr2:179599187;179599186;179599185 |
N2A | 3878 | 11857;11858;11859 | chr2:178734460;178734459;178734458 | chr2:179599187;179599186;179599185 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs754945452 | -0.521 | 0.061 | N | 0.147 | 0.135 | 0.204665344411 | gnomAD-4.0.0 | 3.18317E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86623E-05 | 0 |
R/S | rs1275710464 | None | 0.826 | N | 0.301 | 0.311 | 0.267299060538 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/S | rs1275710464 | None | 0.826 | N | 0.301 | 0.311 | 0.267299060538 | gnomAD-4.0.0 | 6.57056E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46972E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6227 | likely_pathogenic | 0.7398 | pathogenic | -0.933 | Destabilizing | 0.863 | D | 0.303 | neutral | None | None | None | None | N |
R/C | 0.2436 | likely_benign | 0.3228 | benign | -1.035 | Destabilizing | 0.999 | D | 0.337 | neutral | None | None | None | None | N |
R/D | 0.8347 | likely_pathogenic | 0.9011 | pathogenic | 0.063 | Stabilizing | 0.884 | D | 0.32 | neutral | None | None | None | None | N |
R/E | 0.5864 | likely_pathogenic | 0.6723 | pathogenic | 0.213 | Stabilizing | 0.863 | D | 0.283 | neutral | None | None | None | None | N |
R/F | 0.7132 | likely_pathogenic | 0.8214 | pathogenic | -0.744 | Destabilizing | 0.997 | D | 0.33 | neutral | None | None | None | None | N |
R/G | 0.4979 | ambiguous | 0.6298 | pathogenic | -1.223 | Destabilizing | 0.826 | D | 0.334 | neutral | N | 0.509599753 | None | None | N |
R/H | 0.111 | likely_benign | 0.1337 | benign | -1.351 | Destabilizing | 0.991 | D | 0.343 | neutral | None | None | None | None | N |
R/I | 0.431 | ambiguous | 0.5257 | ambiguous | -0.15 | Destabilizing | 0.996 | D | 0.337 | neutral | N | 0.51361182 | None | None | N |
R/K | 0.1181 | likely_benign | 0.1449 | benign | -0.575 | Destabilizing | 0.061 | N | 0.147 | neutral | N | 0.416768547 | None | None | N |
R/L | 0.35 | ambiguous | 0.4352 | ambiguous | -0.15 | Destabilizing | 0.969 | D | 0.309 | neutral | None | None | None | None | N |
R/M | 0.4891 | ambiguous | 0.5889 | pathogenic | -0.66 | Destabilizing | 0.997 | D | 0.321 | neutral | None | None | None | None | N |
R/N | 0.6796 | likely_pathogenic | 0.7879 | pathogenic | -0.429 | Destabilizing | 0.079 | N | 0.149 | neutral | None | None | None | None | N |
R/P | 0.9559 | likely_pathogenic | 0.9747 | pathogenic | -0.393 | Destabilizing | 0.997 | D | 0.305 | neutral | None | None | None | None | N |
R/Q | 0.1221 | likely_benign | 0.1417 | benign | -0.487 | Destabilizing | 0.939 | D | 0.322 | neutral | None | None | None | None | N |
R/S | 0.6137 | likely_pathogenic | 0.7342 | pathogenic | -1.242 | Destabilizing | 0.826 | D | 0.301 | neutral | N | 0.490592508 | None | None | N |
R/T | 0.424 | ambiguous | 0.5331 | ambiguous | -0.897 | Destabilizing | 0.92 | D | 0.306 | neutral | N | 0.465772928 | None | None | N |
R/V | 0.4838 | ambiguous | 0.5874 | pathogenic | -0.393 | Destabilizing | 0.991 | D | 0.324 | neutral | None | None | None | None | N |
R/W | 0.338 | likely_benign | 0.4222 | ambiguous | -0.442 | Destabilizing | 0.999 | D | 0.449 | neutral | None | None | None | None | N |
R/Y | 0.5328 | ambiguous | 0.6565 | pathogenic | -0.173 | Destabilizing | 0.997 | D | 0.325 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.