Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5129 | 15610;15611;15612 | chr2:178734439;178734438;178734437 | chr2:179599166;179599165;179599164 |
N2AB | 4812 | 14659;14660;14661 | chr2:178734439;178734438;178734437 | chr2:179599166;179599165;179599164 |
N2A | 3885 | 11878;11879;11880 | chr2:178734439;178734438;178734437 | chr2:179599166;179599165;179599164 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | None | N | 0.194 | 0.125 | 0.190952846119 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.0729 | likely_benign | 0.0834 | benign | -1.568 | Destabilizing | 0.001 | N | 0.237 | neutral | None | None | None | None | N |
L/C | 0.2201 | likely_benign | 0.2497 | benign | -0.936 | Destabilizing | 0.676 | D | 0.542 | neutral | None | None | None | None | N |
L/D | 0.2332 | likely_benign | 0.2639 | benign | -1.239 | Destabilizing | 0.214 | N | 0.638 | neutral | None | None | None | None | N |
L/E | 0.1279 | likely_benign | 0.1382 | benign | -1.279 | Destabilizing | 0.072 | N | 0.63 | neutral | None | None | None | None | N |
L/F | 0.0617 | likely_benign | 0.0725 | benign | -1.299 | Destabilizing | None | N | 0.255 | neutral | D | 0.550148402 | None | None | N |
L/G | 0.1795 | likely_benign | 0.2127 | benign | -1.847 | Destabilizing | 0.038 | N | 0.61 | neutral | None | None | None | None | N |
L/H | 0.0811 | likely_benign | 0.0888 | benign | -1.109 | Destabilizing | 0.828 | D | 0.626 | neutral | D | 0.584060269 | None | None | N |
L/I | 0.0549 | likely_benign | 0.0582 | benign | -0.89 | Destabilizing | None | N | 0.194 | neutral | N | 0.506438765 | None | None | N |
L/K | 0.1112 | likely_benign | 0.1138 | benign | -0.986 | Destabilizing | 0.072 | N | 0.598 | neutral | None | None | None | None | N |
L/M | 0.0681 | likely_benign | 0.0711 | benign | -0.595 | Destabilizing | 0.214 | N | 0.519 | neutral | None | None | None | None | N |
L/N | 0.1107 | likely_benign | 0.1304 | benign | -0.743 | Destabilizing | 0.214 | N | 0.645 | neutral | None | None | None | None | N |
L/P | 0.4197 | ambiguous | 0.48 | ambiguous | -1.085 | Destabilizing | 0.295 | N | 0.637 | neutral | D | 0.649304493 | None | None | N |
L/Q | 0.0661 | likely_benign | 0.0692 | benign | -1.014 | Destabilizing | 0.356 | N | 0.601 | neutral | None | None | None | None | N |
L/R | 0.0819 | likely_benign | 0.0803 | benign | -0.349 | Destabilizing | 0.171 | N | 0.604 | neutral | N | 0.497256 | None | None | N |
L/S | 0.0745 | likely_benign | 0.0888 | benign | -1.301 | Destabilizing | 0.003 | N | 0.467 | neutral | None | None | None | None | N |
L/T | 0.0659 | likely_benign | 0.0762 | benign | -1.233 | Destabilizing | None | N | 0.344 | neutral | None | None | None | None | N |
L/V | 0.0525 | likely_benign | 0.0541 | benign | -1.085 | Destabilizing | None | N | 0.145 | neutral | N | 0.480224975 | None | None | N |
L/W | 0.1131 | likely_benign | 0.1276 | benign | -1.331 | Destabilizing | 0.676 | D | 0.619 | neutral | None | None | None | None | N |
L/Y | 0.1355 | likely_benign | 0.162 | benign | -1.103 | Destabilizing | 0.12 | N | 0.573 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.