Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5131 | 15616;15617;15618 | chr2:178734433;178734432;178734431 | chr2:179599160;179599159;179599158 |
N2AB | 4814 | 14665;14666;14667 | chr2:178734433;178734432;178734431 | chr2:179599160;179599159;179599158 |
N2A | 3887 | 11884;11885;11886 | chr2:178734433;178734432;178734431 | chr2:179599160;179599159;179599158 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | rs757766582 | -1.126 | None | N | 0.365 | 0.083 | 0.207176502487 | gnomAD-2.1.1 | 7.14E-06 | None | None | None | None | N | None | 4.13E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 7.82E-06 | 0 |
C/Y | rs757766582 | -1.126 | None | N | 0.365 | 0.083 | 0.207176502487 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
C/Y | rs757766582 | -1.126 | None | N | 0.365 | 0.083 | 0.207176502487 | gnomAD-4.0.0 | 5.12468E-06 | None | None | None | None | N | None | 5.07374E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39318E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.0963 | likely_benign | 0.1027 | benign | -1.507 | Destabilizing | None | N | 0.3 | neutral | None | None | None | None | N |
C/D | 0.2171 | likely_benign | 0.314 | benign | -1.312 | Destabilizing | 0.002 | N | 0.57 | neutral | None | None | None | None | N |
C/E | 0.3103 | likely_benign | 0.4391 | ambiguous | -1.066 | Destabilizing | 0.001 | N | 0.596 | neutral | None | None | None | None | N |
C/F | 0.0659 | likely_benign | 0.0767 | benign | -0.881 | Destabilizing | None | N | 0.365 | neutral | N | 0.412902404 | None | None | N |
C/G | 0.0757 | likely_benign | 0.0824 | benign | -1.878 | Destabilizing | 0.001 | N | 0.56 | neutral | N | 0.447693779 | None | None | N |
C/H | 0.1264 | likely_benign | 0.1603 | benign | -2.037 | Highly Destabilizing | 0.021 | N | 0.633 | neutral | None | None | None | None | N |
C/I | 0.1336 | likely_benign | 0.1768 | benign | -0.498 | Destabilizing | 0.002 | N | 0.501 | neutral | None | None | None | None | N |
C/K | 0.2816 | likely_benign | 0.3743 | ambiguous | -0.871 | Destabilizing | 0.001 | N | 0.597 | neutral | None | None | None | None | N |
C/L | 0.1471 | likely_benign | 0.1633 | benign | -0.498 | Destabilizing | 0.001 | N | 0.44 | neutral | None | None | None | None | N |
C/M | 0.2093 | likely_benign | 0.2345 | benign | 0.338 | Stabilizing | 0.041 | N | 0.613 | neutral | None | None | None | None | N |
C/N | 0.1039 | likely_benign | 0.1299 | benign | -1.547 | Destabilizing | 0.002 | N | 0.569 | neutral | None | None | None | None | N |
C/P | 0.782 | likely_pathogenic | 0.8621 | pathogenic | -0.812 | Destabilizing | 0.009 | N | 0.587 | neutral | None | None | None | None | N |
C/Q | 0.1808 | likely_benign | 0.2426 | benign | -1.048 | Destabilizing | 0.009 | N | 0.579 | neutral | None | None | None | None | N |
C/R | 0.1554 | likely_benign | 0.2006 | benign | -1.328 | Destabilizing | None | N | 0.457 | neutral | N | 0.361065431 | None | None | N |
C/S | 0.0601 | likely_benign | 0.0628 | benign | -1.841 | Destabilizing | None | N | 0.305 | neutral | N | 0.271500216 | None | None | N |
C/T | 0.0899 | likely_benign | 0.1036 | benign | -1.403 | Destabilizing | 0.001 | N | 0.527 | neutral | None | None | None | None | N |
C/V | 0.1383 | likely_benign | 0.1655 | benign | -0.812 | Destabilizing | 0.002 | N | 0.511 | neutral | None | None | None | None | N |
C/W | 0.1747 | likely_benign | 0.2059 | benign | -1.268 | Destabilizing | 0.103 | N | 0.62 | neutral | N | 0.497287217 | None | None | N |
C/Y | 0.068 | likely_benign | 0.085 | benign | -1.054 | Destabilizing | None | N | 0.365 | neutral | N | 0.38139852 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.