Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5134 | 15625;15626;15627 | chr2:178734424;178734423;178734422 | chr2:179599151;179599150;179599149 |
N2AB | 4817 | 14674;14675;14676 | chr2:178734424;178734423;178734422 | chr2:179599151;179599150;179599149 |
N2A | 3890 | 11893;11894;11895 | chr2:178734424;178734423;178734422 | chr2:179599151;179599150;179599149 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1362573029 | -2.54 | 0.722 | D | 0.732 | 0.752 | 0.820698191142 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
I/T | rs1362573029 | -2.54 | 0.722 | D | 0.732 | 0.752 | 0.820698191142 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/T | rs1362573029 | -2.54 | 0.722 | D | 0.732 | 0.752 | 0.820698191142 | gnomAD-4.0.0 | 6.57082E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46959E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9058 | likely_pathogenic | 0.9356 | pathogenic | -2.825 | Highly Destabilizing | 0.633 | D | 0.687 | prob.neutral | None | None | None | None | N |
I/C | 0.9094 | likely_pathogenic | 0.9424 | pathogenic | -1.725 | Destabilizing | 0.989 | D | 0.765 | deleterious | None | None | None | None | N |
I/D | 0.9937 | likely_pathogenic | 0.9956 | pathogenic | -3.314 | Highly Destabilizing | 0.987 | D | 0.845 | deleterious | None | None | None | None | N |
I/E | 0.9925 | likely_pathogenic | 0.9946 | pathogenic | -3.005 | Highly Destabilizing | 0.961 | D | 0.845 | deleterious | None | None | None | None | N |
I/F | 0.3847 | ambiguous | 0.4275 | ambiguous | -1.624 | Destabilizing | 0.018 | N | 0.352 | neutral | D | 0.621038261 | None | None | N |
I/G | 0.978 | likely_pathogenic | 0.9845 | pathogenic | -3.394 | Highly Destabilizing | 0.961 | D | 0.821 | deleterious | None | None | None | None | N |
I/H | 0.9769 | likely_pathogenic | 0.9847 | pathogenic | -3.058 | Highly Destabilizing | 0.996 | D | 0.841 | deleterious | None | None | None | None | N |
I/K | 0.9847 | likely_pathogenic | 0.9879 | pathogenic | -1.944 | Destabilizing | 0.961 | D | 0.844 | deleterious | None | None | None | None | N |
I/L | 0.2586 | likely_benign | 0.2917 | benign | -1.102 | Destabilizing | 0.19 | N | 0.442 | neutral | D | 0.614444363 | None | None | N |
I/M | 0.2734 | likely_benign | 0.3271 | benign | -1.251 | Destabilizing | 0.901 | D | 0.687 | prob.neutral | D | 0.761404987 | None | None | N |
I/N | 0.907 | likely_pathogenic | 0.9346 | pathogenic | -2.598 | Highly Destabilizing | 0.983 | D | 0.843 | deleterious | D | 0.827968712 | None | None | N |
I/P | 0.9904 | likely_pathogenic | 0.9938 | pathogenic | -1.67 | Destabilizing | 0.987 | D | 0.843 | deleterious | None | None | None | None | N |
I/Q | 0.9831 | likely_pathogenic | 0.9883 | pathogenic | -2.254 | Highly Destabilizing | 0.987 | D | 0.857 | deleterious | None | None | None | None | N |
I/R | 0.9771 | likely_pathogenic | 0.9804 | pathogenic | -2.007 | Highly Destabilizing | 0.961 | D | 0.843 | deleterious | None | None | None | None | N |
I/S | 0.9283 | likely_pathogenic | 0.9503 | pathogenic | -3.1 | Highly Destabilizing | 0.901 | D | 0.78 | deleterious | D | 0.827968712 | None | None | N |
I/T | 0.9269 | likely_pathogenic | 0.9493 | pathogenic | -2.643 | Highly Destabilizing | 0.722 | D | 0.732 | prob.delet. | D | 0.828194521 | None | None | N |
I/V | 0.1087 | likely_benign | 0.1134 | benign | -1.67 | Destabilizing | 0.003 | N | 0.283 | neutral | D | 0.573037433 | None | None | N |
I/W | 0.9775 | likely_pathogenic | 0.9838 | pathogenic | -2.004 | Highly Destabilizing | 0.996 | D | 0.837 | deleterious | None | None | None | None | N |
I/Y | 0.8754 | likely_pathogenic | 0.8921 | pathogenic | -1.854 | Destabilizing | 0.858 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.