Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5137 | 15634;15635;15636 | chr2:178734415;178734414;178734413 | chr2:179599142;179599141;179599140 |
N2AB | 4820 | 14683;14684;14685 | chr2:178734415;178734414;178734413 | chr2:179599142;179599141;179599140 |
N2A | 3893 | 11902;11903;11904 | chr2:178734415;178734414;178734413 | chr2:179599142;179599141;179599140 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1417172594 | -1.89 | 0.999 | N | 0.5 | 0.437 | 0.376921832658 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 1.29216E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
F/L | rs1417172594 | -1.89 | 0.999 | N | 0.5 | 0.437 | 0.376921832658 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
F/L | rs1417172594 | -1.89 | 0.999 | N | 0.5 | 0.437 | 0.376921832658 | gnomAD-4.0.0 | 2.56245E-06 | None | None | None | None | N | None | 3.38318E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7835 | likely_pathogenic | 0.836 | pathogenic | -2.455 | Highly Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
F/C | 0.3442 | ambiguous | 0.4537 | ambiguous | -2.676 | Highly Destabilizing | 1.0 | D | 0.697 | prob.neutral | N | 0.469923524 | None | None | N |
F/D | 0.9884 | likely_pathogenic | 0.9927 | pathogenic | -2.698 | Highly Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
F/E | 0.9881 | likely_pathogenic | 0.9918 | pathogenic | -2.601 | Highly Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
F/G | 0.9193 | likely_pathogenic | 0.9482 | pathogenic | -2.778 | Highly Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
F/H | 0.8941 | likely_pathogenic | 0.9338 | pathogenic | -1.38 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
F/I | 0.4535 | ambiguous | 0.4994 | ambiguous | -1.453 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | N | 0.478989472 | None | None | N |
F/K | 0.9894 | likely_pathogenic | 0.9929 | pathogenic | -1.858 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
F/L | 0.9116 | likely_pathogenic | 0.9209 | pathogenic | -1.453 | Destabilizing | 0.999 | D | 0.5 | neutral | N | 0.421622848 | None | None | N |
F/M | 0.7095 | likely_pathogenic | 0.734 | pathogenic | -1.737 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
F/N | 0.9287 | likely_pathogenic | 0.9531 | pathogenic | -2.046 | Highly Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
F/P | 0.9771 | likely_pathogenic | 0.984 | pathogenic | -1.787 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
F/Q | 0.967 | likely_pathogenic | 0.9797 | pathogenic | -2.227 | Highly Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
F/R | 0.9688 | likely_pathogenic | 0.9798 | pathogenic | -1.17 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
F/S | 0.7358 | likely_pathogenic | 0.8121 | pathogenic | -2.757 | Highly Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.506011504 | None | None | N |
F/T | 0.8199 | likely_pathogenic | 0.8547 | pathogenic | -2.558 | Highly Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
F/V | 0.333 | likely_benign | 0.3803 | ambiguous | -1.787 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.381676516 | None | None | N |
F/W | 0.7413 | likely_pathogenic | 0.7985 | pathogenic | -0.757 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
F/Y | 0.2831 | likely_benign | 0.3605 | ambiguous | -0.876 | Destabilizing | 0.999 | D | 0.55 | neutral | D | 0.548198286 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.