Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5161 | 15706;15707;15708 | chr2:178734343;178734342;178734341 | chr2:179599070;179599069;179599068 |
N2AB | 4844 | 14755;14756;14757 | chr2:178734343;178734342;178734341 | chr2:179599070;179599069;179599068 |
N2A | 3917 | 11974;11975;11976 | chr2:178734343;178734342;178734341 | chr2:179599070;179599069;179599068 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1205352955 | 0.163 | 0.201 | N | 0.564 | 0.299 | None | gnomAD-2.1.1 | 4.15E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.11E-06 | 0 |
T/I | rs1205352955 | 0.163 | 0.201 | N | 0.564 | 0.299 | None | gnomAD-4.0.0 | 2.0775E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.81574E-06 | 0 | 1.67768E-05 |
T/N | None | None | 0.379 | N | 0.543 | 0.255 | 0.532311620844 | gnomAD-4.0.0 | 6.92501E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.07871E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0643 | likely_benign | 0.0678 | benign | -0.67 | Destabilizing | 0.201 | N | 0.343 | neutral | N | 0.497550326 | None | None | N |
T/C | 0.2688 | likely_benign | 0.3259 | benign | -0.408 | Destabilizing | 0.992 | D | 0.527 | neutral | None | None | None | None | N |
T/D | 0.2259 | likely_benign | 0.271 | benign | -0.295 | Destabilizing | 0.617 | D | 0.522 | neutral | None | None | None | None | N |
T/E | 0.1718 | likely_benign | 0.1982 | benign | -0.279 | Destabilizing | 0.617 | D | 0.519 | neutral | None | None | None | None | N |
T/F | 0.1326 | likely_benign | 0.1478 | benign | -0.589 | Destabilizing | 0.85 | D | 0.583 | neutral | None | None | None | None | N |
T/G | 0.1375 | likely_benign | 0.1714 | benign | -0.952 | Destabilizing | 0.447 | N | 0.567 | neutral | None | None | None | None | N |
T/H | 0.1435 | likely_benign | 0.1625 | benign | -1.243 | Destabilizing | 0.977 | D | 0.551 | neutral | None | None | None | None | N |
T/I | 0.0961 | likely_benign | 0.1064 | benign | -0.002 | Destabilizing | 0.201 | N | 0.564 | neutral | N | 0.497344833 | None | None | N |
T/K | 0.1046 | likely_benign | 0.1151 | benign | -0.845 | Destabilizing | 0.447 | N | 0.509 | neutral | None | None | None | None | N |
T/L | 0.0751 | likely_benign | 0.0801 | benign | -0.002 | Destabilizing | 0.005 | N | 0.261 | neutral | None | None | None | None | N |
T/M | 0.0848 | likely_benign | 0.0863 | benign | 0.124 | Stabilizing | 0.85 | D | 0.563 | neutral | None | None | None | None | N |
T/N | 0.0809 | likely_benign | 0.0899 | benign | -0.744 | Destabilizing | 0.379 | N | 0.543 | neutral | N | 0.495831727 | None | None | N |
T/P | 0.084 | likely_benign | 0.0993 | benign | -0.192 | Destabilizing | 0.004 | N | 0.323 | neutral | N | 0.493115375 | None | None | N |
T/Q | 0.1299 | likely_benign | 0.1409 | benign | -0.829 | Destabilizing | 0.85 | D | 0.579 | neutral | None | None | None | None | N |
T/R | 0.0915 | likely_benign | 0.0932 | benign | -0.668 | Destabilizing | 0.85 | D | 0.575 | neutral | None | None | None | None | N |
T/S | 0.0733 | likely_benign | 0.0808 | benign | -0.966 | Destabilizing | 0.016 | N | 0.22 | neutral | N | 0.490221254 | None | None | N |
T/V | 0.0865 | likely_benign | 0.0947 | benign | -0.192 | Destabilizing | 0.009 | N | 0.196 | neutral | None | None | None | None | N |
T/W | 0.3831 | ambiguous | 0.44 | ambiguous | -0.596 | Destabilizing | 0.992 | D | 0.573 | neutral | None | None | None | None | N |
T/Y | 0.1671 | likely_benign | 0.1947 | benign | -0.371 | Destabilizing | 0.972 | D | 0.574 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.