Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5172 | 15739;15740;15741 | chr2:178733875;178733874;178733873 | chr2:179598602;179598601;179598600 |
N2AB | 4855 | 14788;14789;14790 | chr2:178733875;178733874;178733873 | chr2:179598602;179598601;179598600 |
N2A | 3928 | 12007;12008;12009 | chr2:178733875;178733874;178733873 | chr2:179598602;179598601;179598600 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 1.0 | D | 0.7 | 0.483 | 0.307648195649 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 1.94099E-04 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.565 | likely_pathogenic | 0.6115 | pathogenic | -0.249 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
K/C | 0.82 | likely_pathogenic | 0.8544 | pathogenic | -0.289 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
K/D | 0.7607 | likely_pathogenic | 0.7939 | pathogenic | 0.158 | Stabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
K/E | 0.245 | likely_benign | 0.2841 | benign | 0.237 | Stabilizing | 0.999 | D | 0.628 | neutral | N | 0.510586158 | None | None | N |
K/F | 0.8949 | likely_pathogenic | 0.9255 | pathogenic | -0.007 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/G | 0.6002 | likely_pathogenic | 0.6269 | pathogenic | -0.574 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
K/H | 0.4197 | ambiguous | 0.4596 | ambiguous | -0.841 | Destabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | N |
K/I | 0.6122 | likely_pathogenic | 0.7038 | pathogenic | 0.569 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/L | 0.5555 | ambiguous | 0.625 | pathogenic | 0.569 | Stabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
K/M | 0.4153 | ambiguous | 0.477 | ambiguous | 0.312 | Stabilizing | 1.0 | D | 0.621 | neutral | D | 0.621298269 | None | None | N |
K/N | 0.6045 | likely_pathogenic | 0.6434 | pathogenic | -0.059 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | D | 0.588100865 | None | None | N |
K/P | 0.929 | likely_pathogenic | 0.9393 | pathogenic | 0.328 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/Q | 0.1468 | likely_benign | 0.1644 | benign | -0.141 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | N | 0.490099948 | None | None | N |
K/R | 0.0827 | likely_benign | 0.0894 | benign | -0.339 | Destabilizing | 0.999 | D | 0.557 | neutral | N | 0.511606496 | None | None | N |
K/S | 0.5714 | likely_pathogenic | 0.6008 | pathogenic | -0.659 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | N |
K/T | 0.3001 | likely_benign | 0.3274 | benign | -0.39 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | N | 0.503649496 | None | None | N |
K/V | 0.5494 | ambiguous | 0.6369 | pathogenic | 0.328 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/W | 0.838 | likely_pathogenic | 0.8758 | pathogenic | 0.073 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/Y | 0.7848 | likely_pathogenic | 0.8296 | pathogenic | 0.36 | Stabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.