Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5179 | 15760;15761;15762 | chr2:178733854;178733853;178733852 | chr2:179598581;179598580;179598579 |
N2AB | 4862 | 14809;14810;14811 | chr2:178733854;178733853;178733852 | chr2:179598581;179598580;179598579 |
N2A | 3935 | 12028;12029;12030 | chr2:178733854;178733853;178733852 | chr2:179598581;179598580;179598579 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs536853382 | None | 0.034 | N | 0.369 | 0.25 | 0.285316908763 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.411 | ambiguous | 0.4227 | ambiguous | -0.838 | Destabilizing | 0.996 | D | 0.571 | neutral | None | None | None | None | I |
A/D | 0.6172 | likely_pathogenic | 0.6775 | pathogenic | -1.313 | Destabilizing | 0.923 | D | 0.62 | neutral | None | None | None | None | I |
A/E | 0.4904 | ambiguous | 0.5377 | ambiguous | -1.256 | Destabilizing | 0.901 | D | 0.627 | neutral | D | 0.581302887 | None | None | I |
A/F | 0.357 | ambiguous | 0.3846 | ambiguous | -0.683 | Destabilizing | 0.923 | D | 0.626 | neutral | None | None | None | None | I |
A/G | 0.1816 | likely_benign | 0.2076 | benign | -1.194 | Destabilizing | 0.565 | D | 0.517 | neutral | D | 0.564029223 | None | None | I |
A/H | 0.6537 | likely_pathogenic | 0.6943 | pathogenic | -1.421 | Destabilizing | 0.996 | D | 0.603 | neutral | None | None | None | None | I |
A/I | 0.1917 | likely_benign | 0.2004 | benign | -0.028 | Destabilizing | 0.372 | N | 0.602 | neutral | None | None | None | None | I |
A/K | 0.6949 | likely_pathogenic | 0.7442 | pathogenic | -1.337 | Destabilizing | 0.923 | D | 0.635 | neutral | None | None | None | None | I |
A/L | 0.2005 | likely_benign | 0.2191 | benign | -0.028 | Destabilizing | 0.633 | D | 0.493 | neutral | None | None | None | None | I |
A/M | 0.2607 | likely_benign | 0.2787 | benign | -0.08 | Destabilizing | 0.979 | D | 0.608 | neutral | None | None | None | None | I |
A/N | 0.5097 | ambiguous | 0.5618 | ambiguous | -1.211 | Destabilizing | 0.923 | D | 0.633 | neutral | None | None | None | None | I |
A/P | 0.7441 | likely_pathogenic | 0.7858 | pathogenic | -0.258 | Destabilizing | 0.949 | D | 0.642 | neutral | D | 0.62971059 | None | None | I |
A/Q | 0.5365 | ambiguous | 0.5785 | pathogenic | -1.221 | Destabilizing | 0.961 | D | 0.619 | neutral | None | None | None | None | I |
A/R | 0.6252 | likely_pathogenic | 0.6612 | pathogenic | -1.112 | Destabilizing | 0.923 | D | 0.645 | neutral | None | None | None | None | I |
A/S | 0.1173 | likely_benign | 0.1249 | benign | -1.601 | Destabilizing | 0.075 | N | 0.345 | neutral | N | 0.511034339 | None | None | I |
A/T | 0.0902 | likely_benign | 0.0921 | benign | -1.436 | Destabilizing | 0.034 | N | 0.369 | neutral | N | 0.47861351 | None | None | I |
A/V | 0.0932 | likely_benign | 0.0916 | benign | -0.258 | Destabilizing | 0.008 | N | 0.235 | neutral | N | 0.415607286 | None | None | I |
A/W | 0.8451 | likely_pathogenic | 0.8686 | pathogenic | -1.205 | Destabilizing | 0.996 | D | 0.63 | neutral | None | None | None | None | I |
A/Y | 0.571 | likely_pathogenic | 0.6217 | pathogenic | -0.724 | Destabilizing | 0.961 | D | 0.633 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.