Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5195 | 15808;15809;15810 | chr2:178733806;178733805;178733804 | chr2:179598533;179598532;179598531 |
N2AB | 4878 | 14857;14858;14859 | chr2:178733806;178733805;178733804 | chr2:179598533;179598532;179598531 |
N2A | 3951 | 12076;12077;12078 | chr2:178733806;178733805;178733804 | chr2:179598533;179598532;179598531 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs72648931 | -0.117 | 0.454 | N | 0.415 | 0.244 | None | gnomAD-2.1.1 | 9.81729E-04 | None | None | None | None | I | None | 1.08696E-02 | 3.39443E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs72648931 | -0.117 | 0.454 | N | 0.415 | 0.244 | None | gnomAD-3.1.2 | 2.82582E-03 | None | None | None | None | I | None | 9.91413E-03 | 1.04781E-03 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.43678E-03 |
E/G | rs72648931 | -0.117 | 0.454 | N | 0.415 | 0.244 | None | 1000 genomes | 2.39617E-03 | None | None | None | None | I | None | 9.1E-03 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
E/G | rs72648931 | -0.117 | 0.454 | N | 0.415 | 0.244 | None | gnomAD-4.0.0 | 4.85801E-04 | None | None | None | None | I | None | 9.52724E-03 | 4.99917E-04 | None | 0 | 0 | None | 0 | 0 | 1.18669E-05 | 0 | 4.00154E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.097 | likely_benign | 0.1126 | benign | 0.005 | Stabilizing | 0.005 | N | 0.213 | neutral | N | 0.498671488 | None | None | I |
E/C | 0.7395 | likely_pathogenic | 0.816 | pathogenic | -0.219 | Destabilizing | 0.993 | D | 0.442 | neutral | None | None | None | None | I |
E/D | 0.0922 | likely_benign | 0.1137 | benign | -0.369 | Destabilizing | 0.625 | D | 0.439 | neutral | N | 0.504786338 | None | None | I |
E/F | 0.5381 | ambiguous | 0.6435 | pathogenic | 0.009 | Stabilizing | 0.974 | D | 0.463 | neutral | None | None | None | None | I |
E/G | 0.1188 | likely_benign | 0.141 | benign | -0.118 | Destabilizing | 0.454 | N | 0.415 | neutral | N | 0.509040832 | None | None | I |
E/H | 0.3136 | likely_benign | 0.3825 | ambiguous | 0.633 | Stabilizing | 0.991 | D | 0.387 | neutral | None | None | None | None | I |
E/I | 0.2492 | likely_benign | 0.3249 | benign | 0.274 | Stabilizing | 0.949 | D | 0.495 | neutral | None | None | None | None | I |
E/K | 0.0942 | likely_benign | 0.0991 | benign | 0.457 | Stabilizing | 0.801 | D | 0.421 | neutral | N | 0.510101189 | None | None | I |
E/L | 0.2304 | likely_benign | 0.2862 | benign | 0.274 | Stabilizing | 0.842 | D | 0.522 | neutral | None | None | None | None | I |
E/M | 0.3161 | likely_benign | 0.3841 | ambiguous | 0.009 | Stabilizing | 0.998 | D | 0.425 | neutral | None | None | None | None | I |
E/N | 0.1677 | likely_benign | 0.2187 | benign | 0.122 | Stabilizing | 0.842 | D | 0.457 | neutral | None | None | None | None | I |
E/P | 0.2442 | likely_benign | 0.2844 | benign | 0.202 | Stabilizing | 0.974 | D | 0.471 | neutral | None | None | None | None | I |
E/Q | 0.0986 | likely_benign | 0.1073 | benign | 0.144 | Stabilizing | 0.891 | D | 0.488 | neutral | N | 0.470630369 | None | None | I |
E/R | 0.1751 | likely_benign | 0.1859 | benign | 0.709 | Stabilizing | 0.974 | D | 0.425 | neutral | None | None | None | None | I |
E/S | 0.1183 | likely_benign | 0.1452 | benign | 0.013 | Stabilizing | 0.172 | N | 0.218 | neutral | None | None | None | None | I |
E/T | 0.1584 | likely_benign | 0.1983 | benign | 0.125 | Stabilizing | 0.728 | D | 0.421 | neutral | None | None | None | None | I |
E/V | 0.1517 | likely_benign | 0.1831 | benign | 0.202 | Stabilizing | 0.669 | D | 0.49 | neutral | D | 0.572310485 | None | None | I |
E/W | 0.7844 | likely_pathogenic | 0.8486 | pathogenic | 0.065 | Stabilizing | 0.998 | D | 0.529 | neutral | None | None | None | None | I |
E/Y | 0.4054 | ambiguous | 0.497 | ambiguous | 0.238 | Stabilizing | 0.991 | D | 0.441 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.