Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5204 | 15835;15836;15837 | chr2:178733779;178733778;178733777 | chr2:179598506;179598505;179598504 |
N2AB | 4887 | 14884;14885;14886 | chr2:178733779;178733778;178733777 | chr2:179598506;179598505;179598504 |
N2A | 3960 | 12103;12104;12105 | chr2:178733779;178733778;178733777 | chr2:179598506;179598505;179598504 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs1171039782 | -0.382 | 0.001 | N | 0.308 | 0.258 | 0.0846915920261 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1785 | likely_benign | 0.1866 | benign | -0.342 | Destabilizing | 0.201 | N | 0.437 | neutral | N | 0.458226763 | None | None | I |
G/C | 0.3088 | likely_benign | 0.3475 | ambiguous | -0.768 | Destabilizing | 0.976 | D | 0.665 | neutral | N | 0.485880696 | None | None | I |
G/D | 0.1047 | likely_benign | 0.1153 | benign | -0.815 | Destabilizing | 0.001 | N | 0.308 | neutral | N | 0.325721669 | None | None | I |
G/E | 0.1414 | likely_benign | 0.1378 | benign | -0.966 | Destabilizing | 0.002 | N | 0.42 | neutral | None | None | None | None | I |
G/F | 0.5886 | likely_pathogenic | 0.6535 | pathogenic | -0.992 | Destabilizing | 0.982 | D | 0.659 | neutral | None | None | None | None | I |
G/H | 0.3667 | ambiguous | 0.4135 | ambiguous | -0.781 | Destabilizing | 0.947 | D | 0.579 | neutral | None | None | None | None | I |
G/I | 0.4487 | ambiguous | 0.4859 | ambiguous | -0.358 | Destabilizing | 0.826 | D | 0.666 | neutral | None | None | None | None | I |
G/K | 0.4211 | ambiguous | 0.4537 | ambiguous | -1.034 | Destabilizing | 0.539 | D | 0.509 | neutral | None | None | None | None | I |
G/L | 0.4645 | ambiguous | 0.5214 | ambiguous | -0.358 | Destabilizing | 0.7 | D | 0.655 | neutral | None | None | None | None | I |
G/M | 0.5302 | ambiguous | 0.5645 | pathogenic | -0.345 | Destabilizing | 0.982 | D | 0.661 | neutral | None | None | None | None | I |
G/N | 0.1525 | likely_benign | 0.1677 | benign | -0.563 | Destabilizing | 0.399 | N | 0.43 | neutral | None | None | None | None | I |
G/P | 0.918 | likely_pathogenic | 0.9303 | pathogenic | -0.317 | Destabilizing | 0.826 | D | 0.569 | neutral | None | None | None | None | I |
G/Q | 0.2657 | likely_benign | 0.2877 | benign | -0.855 | Destabilizing | 0.539 | D | 0.569 | neutral | None | None | None | None | I |
G/R | 0.3348 | likely_benign | 0.363 | ambiguous | -0.584 | Destabilizing | 0.468 | N | 0.567 | neutral | N | 0.450289726 | None | None | I |
G/S | 0.1077 | likely_benign | 0.118 | benign | -0.689 | Destabilizing | 0.201 | N | 0.425 | neutral | N | 0.456279581 | None | None | I |
G/T | 0.2812 | likely_benign | 0.3049 | benign | -0.777 | Destabilizing | 0.7 | D | 0.515 | neutral | None | None | None | None | I |
G/V | 0.3256 | likely_benign | 0.363 | ambiguous | -0.317 | Destabilizing | 0.638 | D | 0.649 | neutral | N | 0.458651893 | None | None | I |
G/W | 0.4582 | ambiguous | 0.4985 | ambiguous | -1.208 | Destabilizing | 0.982 | D | 0.61 | neutral | None | None | None | None | I |
G/Y | 0.371 | ambiguous | 0.4312 | ambiguous | -0.848 | Destabilizing | 0.982 | D | 0.658 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.