Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5210 | 15853;15854;15855 | chr2:178733761;178733760;178733759 | chr2:179598488;179598487;179598486 |
N2AB | 4893 | 14902;14903;14904 | chr2:178733761;178733760;178733759 | chr2:179598488;179598487;179598486 |
N2A | 3966 | 12121;12122;12123 | chr2:178733761;178733760;178733759 | chr2:179598488;179598487;179598486 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.904 | D | 0.396 | 0.232 | 0.400033932507 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1467 | likely_benign | 0.1768 | benign | -0.464 | Destabilizing | 0.822 | D | 0.449 | neutral | D | 0.544684459 | None | None | N |
E/C | 0.8653 | likely_pathogenic | 0.9225 | pathogenic | -0.141 | Destabilizing | 0.998 | D | 0.652 | neutral | None | None | None | None | N |
E/D | 0.1212 | likely_benign | 0.1463 | benign | -0.516 | Destabilizing | 0.002 | N | 0.155 | neutral | N | 0.500834419 | None | None | N |
E/F | 0.8307 | likely_pathogenic | 0.9017 | pathogenic | -0.126 | Destabilizing | 0.993 | D | 0.599 | neutral | None | None | None | None | N |
E/G | 0.1283 | likely_benign | 0.1609 | benign | -0.734 | Destabilizing | 0.822 | D | 0.457 | neutral | D | 0.558537896 | None | None | N |
E/H | 0.55 | ambiguous | 0.6556 | pathogenic | -0.09 | Destabilizing | 0.993 | D | 0.447 | neutral | None | None | None | None | N |
E/I | 0.4689 | ambiguous | 0.593 | pathogenic | 0.233 | Stabilizing | 0.978 | D | 0.587 | neutral | None | None | None | None | N |
E/K | 0.1561 | likely_benign | 0.1884 | benign | 0.112 | Stabilizing | 0.822 | D | 0.425 | neutral | D | 0.615309917 | None | None | N |
E/L | 0.4768 | ambiguous | 0.5951 | pathogenic | 0.233 | Stabilizing | 0.978 | D | 0.567 | neutral | None | None | None | None | N |
E/M | 0.5261 | ambiguous | 0.6407 | pathogenic | 0.381 | Stabilizing | 0.998 | D | 0.571 | neutral | None | None | None | None | N |
E/N | 0.247 | likely_benign | 0.3139 | benign | -0.323 | Destabilizing | 0.754 | D | 0.415 | neutral | None | None | None | None | N |
E/P | 0.369 | ambiguous | 0.4644 | ambiguous | 0.022 | Stabilizing | 0.978 | D | 0.465 | neutral | None | None | None | None | N |
E/Q | 0.1649 | likely_benign | 0.1973 | benign | -0.23 | Destabilizing | 0.904 | D | 0.396 | neutral | D | 0.555039172 | None | None | N |
E/R | 0.2952 | likely_benign | 0.354 | ambiguous | 0.349 | Stabilizing | 0.978 | D | 0.435 | neutral | None | None | None | None | N |
E/S | 0.2046 | likely_benign | 0.2469 | benign | -0.508 | Destabilizing | 0.86 | D | 0.409 | neutral | None | None | None | None | N |
E/T | 0.2368 | likely_benign | 0.3098 | benign | -0.284 | Destabilizing | 0.86 | D | 0.445 | neutral | None | None | None | None | N |
E/V | 0.2688 | likely_benign | 0.355 | ambiguous | 0.022 | Stabilizing | 0.97 | D | 0.489 | neutral | D | 0.583452947 | None | None | N |
E/W | 0.9046 | likely_pathogenic | 0.946 | pathogenic | 0.079 | Stabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | N |
E/Y | 0.677 | likely_pathogenic | 0.7899 | pathogenic | 0.127 | Stabilizing | 0.993 | D | 0.565 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.