Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5214 | 15865;15866;15867 | chr2:178733749;178733748;178733747 | chr2:179598476;179598475;179598474 |
N2AB | 4897 | 14914;14915;14916 | chr2:178733749;178733748;178733747 | chr2:179598476;179598475;179598474 |
N2A | 3970 | 12133;12134;12135 | chr2:178733749;178733748;178733747 | chr2:179598476;179598475;179598474 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.001 | N | 0.195 | 0.078 | 0.386721274199 | gnomAD-4.0.0 | 1.59118E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88232E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3275 | likely_benign | 0.4153 | ambiguous | -2.457 | Highly Destabilizing | 0.218 | N | 0.658 | neutral | None | None | None | None | N |
I/C | 0.4854 | ambiguous | 0.6009 | pathogenic | -1.606 | Destabilizing | 0.973 | D | 0.727 | prob.delet. | None | None | None | None | N |
I/D | 0.6327 | likely_pathogenic | 0.7438 | pathogenic | -2.649 | Highly Destabilizing | 0.967 | D | 0.809 | deleterious | None | None | None | None | N |
I/E | 0.444 | ambiguous | 0.5636 | ambiguous | -2.524 | Highly Destabilizing | 0.906 | D | 0.798 | deleterious | None | None | None | None | N |
I/F | 0.0989 | likely_benign | 0.1177 | benign | -1.555 | Destabilizing | 0.782 | D | 0.653 | neutral | N | 0.50931571 | None | None | N |
I/G | 0.5175 | ambiguous | 0.6345 | pathogenic | -2.915 | Highly Destabilizing | 0.906 | D | 0.775 | deleterious | None | None | None | None | N |
I/H | 0.3452 | ambiguous | 0.4768 | ambiguous | -2.328 | Highly Destabilizing | 0.991 | D | 0.79 | deleterious | None | None | None | None | N |
I/K | 0.3269 | likely_benign | 0.4469 | ambiguous | -2.103 | Highly Destabilizing | 0.906 | D | 0.793 | deleterious | None | None | None | None | N |
I/L | 0.1012 | likely_benign | 0.1156 | benign | -1.178 | Destabilizing | 0.001 | N | 0.214 | neutral | N | 0.502227031 | None | None | N |
I/M | 0.0775 | likely_benign | 0.0904 | benign | -0.902 | Destabilizing | 0.782 | D | 0.663 | neutral | D | 0.620840228 | None | None | N |
I/N | 0.1822 | likely_benign | 0.2621 | benign | -2.119 | Highly Destabilizing | 0.957 | D | 0.811 | deleterious | D | 0.690610545 | None | None | N |
I/P | 0.7903 | likely_pathogenic | 0.8265 | pathogenic | -1.581 | Destabilizing | 0.967 | D | 0.81 | deleterious | None | None | None | None | N |
I/Q | 0.3301 | likely_benign | 0.4434 | ambiguous | -2.145 | Highly Destabilizing | 0.967 | D | 0.801 | deleterious | None | None | None | None | N |
I/R | 0.2163 | likely_benign | 0.3003 | benign | -1.564 | Destabilizing | 0.906 | D | 0.809 | deleterious | None | None | None | None | N |
I/S | 0.2474 | likely_benign | 0.3387 | benign | -2.728 | Highly Destabilizing | 0.782 | D | 0.734 | prob.delet. | D | 0.62096376 | None | None | N |
I/T | 0.1997 | likely_benign | 0.255 | benign | -2.482 | Highly Destabilizing | 0.505 | D | 0.682 | prob.neutral | D | 0.576158116 | None | None | N |
I/V | 0.0722 | likely_benign | 0.0786 | benign | -1.581 | Destabilizing | 0.001 | N | 0.195 | neutral | N | 0.499259993 | None | None | N |
I/W | 0.5176 | ambiguous | 0.5963 | pathogenic | -1.878 | Destabilizing | 0.991 | D | 0.769 | deleterious | None | None | None | None | N |
I/Y | 0.236 | likely_benign | 0.3021 | benign | -1.653 | Destabilizing | 0.906 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.