Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5230 | 15913;15914;15915 | chr2:178733701;178733700;178733699 | chr2:179598428;179598427;179598426 |
N2AB | 4913 | 14962;14963;14964 | chr2:178733701;178733700;178733699 | chr2:179598428;179598427;179598426 |
N2A | 3986 | 12181;12182;12183 | chr2:178733701;178733700;178733699 | chr2:179598428;179598427;179598426 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs369294144 | -0.849 | 0.117 | N | 0.337 | 0.157 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs369294144 | -0.849 | 0.117 | N | 0.337 | 0.157 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs369294144 | -0.849 | 0.117 | N | 0.337 | 0.157 | None | gnomAD-4.0.0 | 2.47869E-06 | None | None | None | None | N | None | 2.66944E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.20246E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2309 | likely_benign | 0.3019 | benign | -2.202 | Highly Destabilizing | 0.977 | D | 0.517 | neutral | N | 0.48065576 | None | None | N |
V/C | 0.8008 | likely_pathogenic | 0.8281 | pathogenic | -2.197 | Highly Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
V/D | 0.8874 | likely_pathogenic | 0.9518 | pathogenic | -2.911 | Highly Destabilizing | 0.999 | D | 0.776 | deleterious | D | 0.73581048 | None | None | N |
V/E | 0.8433 | likely_pathogenic | 0.9184 | pathogenic | -2.75 | Highly Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
V/F | 0.5281 | ambiguous | 0.666 | pathogenic | -1.465 | Destabilizing | 0.993 | D | 0.775 | deleterious | D | 0.631228988 | None | None | N |
V/G | 0.4421 | ambiguous | 0.5623 | ambiguous | -2.681 | Highly Destabilizing | 0.999 | D | 0.749 | deleterious | D | 0.659526353 | None | None | N |
V/H | 0.945 | likely_pathogenic | 0.9758 | pathogenic | -2.286 | Highly Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
V/I | 0.0797 | likely_benign | 0.0895 | benign | -0.888 | Destabilizing | 0.117 | N | 0.337 | neutral | N | 0.515955965 | None | None | N |
V/K | 0.9017 | likely_pathogenic | 0.9541 | pathogenic | -1.881 | Destabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | N |
V/L | 0.3072 | likely_benign | 0.3853 | ambiguous | -0.888 | Destabilizing | 0.898 | D | 0.503 | neutral | D | 0.546080145 | None | None | N |
V/M | 0.2492 | likely_benign | 0.3441 | ambiguous | -1.089 | Destabilizing | 0.995 | D | 0.791 | deleterious | None | None | None | None | N |
V/N | 0.6832 | likely_pathogenic | 0.8232 | pathogenic | -2.148 | Highly Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
V/P | 0.7874 | likely_pathogenic | 0.8934 | pathogenic | -1.298 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
V/Q | 0.8513 | likely_pathogenic | 0.9214 | pathogenic | -2.107 | Highly Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
V/R | 0.8707 | likely_pathogenic | 0.9285 | pathogenic | -1.564 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
V/S | 0.4018 | ambiguous | 0.5259 | ambiguous | -2.763 | Highly Destabilizing | 0.998 | D | 0.738 | prob.delet. | None | None | None | None | N |
V/T | 0.2588 | likely_benign | 0.3402 | ambiguous | -2.465 | Highly Destabilizing | 0.983 | D | 0.663 | neutral | None | None | None | None | N |
V/W | 0.9783 | likely_pathogenic | 0.9913 | pathogenic | -1.872 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
V/Y | 0.9163 | likely_pathogenic | 0.958 | pathogenic | -1.549 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.