Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5235 | 15928;15929;15930 | chr2:178733686;178733685;178733684 | chr2:179598413;179598412;179598411 |
N2AB | 4918 | 14977;14978;14979 | chr2:178733686;178733685;178733684 | chr2:179598413;179598412;179598411 |
N2A | 3991 | 12196;12197;12198 | chr2:178733686;178733685;178733684 | chr2:179598413;179598412;179598411 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.638 | N | 0.757 | 0.286 | 0.558422169324 | gnomAD-4.0.0 | 1.59126E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43303E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0676 | likely_benign | 0.0809 | benign | -0.189 | Destabilizing | 0.002 | N | 0.279 | neutral | N | 0.368798831 | None | None | N |
G/C | 0.1579 | likely_benign | 0.2116 | benign | -0.647 | Destabilizing | 0.011 | N | 0.573 | neutral | None | None | None | None | N |
G/D | 0.2465 | likely_benign | 0.3913 | ambiguous | 0.156 | Stabilizing | 0.7 | D | 0.717 | prob.delet. | None | None | None | None | N |
G/E | 0.1799 | likely_benign | 0.2771 | benign | 0.118 | Stabilizing | 0.638 | D | 0.721 | prob.delet. | N | 0.440007777 | None | None | N |
G/F | 0.4862 | ambiguous | 0.6751 | pathogenic | -0.444 | Destabilizing | 0.826 | D | 0.79 | deleterious | None | None | None | None | N |
G/H | 0.3184 | likely_benign | 0.4647 | ambiguous | -0.709 | Destabilizing | 0.947 | D | 0.735 | prob.delet. | None | None | None | None | N |
G/I | 0.2127 | likely_benign | 0.318 | benign | 0.205 | Stabilizing | 0.7 | D | 0.796 | deleterious | None | None | None | None | N |
G/K | 0.2866 | likely_benign | 0.4309 | ambiguous | -0.613 | Destabilizing | 0.539 | D | 0.719 | prob.delet. | None | None | None | None | N |
G/L | 0.2952 | likely_benign | 0.4273 | ambiguous | 0.205 | Stabilizing | 0.539 | D | 0.704 | prob.neutral | None | None | None | None | N |
G/M | 0.3651 | ambiguous | 0.4981 | ambiguous | -0.085 | Destabilizing | 0.947 | D | 0.765 | deleterious | None | None | None | None | N |
G/N | 0.2655 | likely_benign | 0.3867 | ambiguous | -0.361 | Destabilizing | 0.539 | D | 0.604 | neutral | None | None | None | None | N |
G/P | 0.634 | likely_pathogenic | 0.824 | pathogenic | 0.117 | Stabilizing | 0.7 | D | 0.755 | deleterious | None | None | None | None | N |
G/Q | 0.2307 | likely_benign | 0.3173 | benign | -0.405 | Destabilizing | 0.7 | D | 0.771 | deleterious | None | None | None | None | N |
G/R | 0.1818 | likely_benign | 0.273 | benign | -0.517 | Destabilizing | 0.638 | D | 0.757 | deleterious | N | 0.504696727 | None | None | N |
G/S | 0.0727 | likely_benign | 0.084 | benign | -0.748 | Destabilizing | 0.02 | N | 0.319 | neutral | None | None | None | None | N |
G/T | 0.1118 | likely_benign | 0.1485 | benign | -0.667 | Destabilizing | 0.539 | D | 0.653 | neutral | None | None | None | None | N |
G/V | 0.1536 | likely_benign | 0.2295 | benign | 0.117 | Stabilizing | 0.468 | N | 0.713 | prob.delet. | N | 0.507964228 | None | None | N |
G/W | 0.3836 | ambiguous | 0.5563 | ambiguous | -0.826 | Destabilizing | 0.982 | D | 0.706 | prob.neutral | None | None | None | None | N |
G/Y | 0.3567 | ambiguous | 0.5228 | ambiguous | -0.335 | Destabilizing | 0.947 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.