Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC524115946;15947;15948 chr2:178733668;178733667;178733666chr2:179598395;179598394;179598393
N2AB492414995;14996;14997 chr2:178733668;178733667;178733666chr2:179598395;179598394;179598393
N2A399712214;12215;12216 chr2:178733668;178733667;178733666chr2:179598395;179598394;179598393
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTG
  • RefSeq wild type template codon: GAC
  • Domain: Ig-35
  • Domain position: 74
  • Structural Position: 157
  • Q(SASA): 0.3041
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P rs1448200477 None 0.989 D 0.707 0.512 0.841180832786 gnomAD-3.1.2 6.57E-06 None None None None N None 0 0 0 0 0 None 0 0 1.47E-05 0 0
L/P rs1448200477 None 0.989 D 0.707 0.512 0.841180832786 gnomAD-4.0.0 6.56944E-06 None None None None N None 0 0 None 0 0 None 0 0 1.46977E-05 0 0
L/Q rs1448200477 None 0.062 N 0.501 0.296 0.613699239204 gnomAD-4.0.0 1.59264E-06 None None None None N None 0 0 None 0 0 None 0 2.41429E-04 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1898 likely_benign 0.1927 benign -1.731 Destabilizing 0.525 D 0.552 neutral None None None None N
L/C 0.3777 ambiguous 0.3934 ambiguous -1.046 Destabilizing 0.998 D 0.603 neutral None None None None N
L/D 0.6817 likely_pathogenic 0.6853 pathogenic -1.34 Destabilizing 0.949 D 0.697 prob.neutral None None None None N
L/E 0.2616 likely_benign 0.272 benign -1.361 Destabilizing 0.728 D 0.671 neutral None None None None N
L/F 0.1003 likely_benign 0.0934 benign -1.368 Destabilizing 0.037 N 0.348 neutral None None None None N
L/G 0.5764 likely_pathogenic 0.5864 pathogenic -2.032 Highly Destabilizing 0.915 D 0.696 prob.neutral None None None None N
L/H 0.1195 likely_benign 0.1192 benign -1.206 Destabilizing 0.993 D 0.695 prob.neutral None None None None N
L/I 0.062 likely_benign 0.0603 benign -0.979 Destabilizing 0.016 N 0.347 neutral None None None None N
L/K 0.145 likely_benign 0.148 benign -1.059 Destabilizing 0.728 D 0.661 neutral None None None None N
L/M 0.0887 likely_benign 0.0886 benign -0.692 Destabilizing 0.934 D 0.603 neutral N 0.48486702 None None N
L/N 0.3686 ambiguous 0.3542 ambiguous -0.844 Destabilizing 0.974 D 0.709 prob.delet. None None None None N
L/P 0.9666 likely_pathogenic 0.9657 pathogenic -1.2 Destabilizing 0.989 D 0.707 prob.neutral D 0.585420739 None None N
L/Q 0.0926 likely_benign 0.0914 benign -1.105 Destabilizing 0.062 N 0.501 neutral N 0.367175513 None None N
L/R 0.1 likely_benign 0.1016 benign -0.415 Destabilizing 0.934 D 0.669 neutral N 0.42207077 None None N
L/S 0.2137 likely_benign 0.2132 benign -1.45 Destabilizing 0.842 D 0.665 neutral None None None None N
L/T 0.132 likely_benign 0.1369 benign -1.362 Destabilizing 0.842 D 0.599 neutral None None None None N
L/V 0.0606 likely_benign 0.0613 benign -1.2 Destabilizing 0.012 N 0.275 neutral N 0.445420418 None None N
L/W 0.1965 likely_benign 0.1943 benign -1.393 Destabilizing 0.998 D 0.669 neutral None None None None N
L/Y 0.2592 likely_benign 0.2553 benign -1.171 Destabilizing 0.904 D 0.615 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.