Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5272 | 16039;16040;16041 | chr2:178733479;178733478;178733477 | chr2:179598206;179598205;179598204 |
N2AB | 4955 | 15088;15089;15090 | chr2:178733479;178733478;178733477 | chr2:179598206;179598205;179598204 |
N2A | 4028 | 12307;12308;12309 | chr2:178733479;178733478;178733477 | chr2:179598206;179598205;179598204 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs746406893 | -0.216 | 0.999 | D | 0.495 | 0.658 | 0.830710548829 | gnomAD-2.1.1 | 2.86E-05 | None | None | None | None | I | None | 2.48077E-04 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 7.84E-06 | 0 |
V/M | rs746406893 | -0.216 | 0.999 | D | 0.495 | 0.658 | 0.830710548829 | gnomAD-3.1.2 | 7.88E-05 | None | None | None | None | I | None | 1.92985E-04 | 1.30907E-04 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 4.78469E-04 |
V/M | rs746406893 | -0.216 | 0.999 | D | 0.495 | 0.658 | 0.830710548829 | gnomAD-4.0.0 | 1.92121E-05 | None | None | None | None | I | None | 2.93662E-04 | 5.0005E-05 | None | 0 | 0 | None | 0 | 0 | 4.23834E-06 | 0 | 1.60128E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5988 | likely_pathogenic | 0.5064 | ambiguous | -1.591 | Destabilizing | 0.989 | D | 0.445 | neutral | D | 0.603219916 | None | None | I |
V/C | 0.9476 | likely_pathogenic | 0.9272 | pathogenic | -1.114 | Destabilizing | 1.0 | D | 0.439 | neutral | None | None | None | None | I |
V/D | 0.9678 | likely_pathogenic | 0.9468 | pathogenic | -1.251 | Destabilizing | 0.999 | D | 0.536 | neutral | None | None | None | None | I |
V/E | 0.9259 | likely_pathogenic | 0.8772 | pathogenic | -1.2 | Destabilizing | 0.998 | D | 0.455 | neutral | D | 0.722636044 | None | None | I |
V/F | 0.7242 | likely_pathogenic | 0.6018 | pathogenic | -1.142 | Destabilizing | 1.0 | D | 0.451 | neutral | None | None | None | None | I |
V/G | 0.6849 | likely_pathogenic | 0.6262 | pathogenic | -1.967 | Destabilizing | 0.998 | D | 0.515 | neutral | D | 0.770772647 | None | None | I |
V/H | 0.9814 | likely_pathogenic | 0.9637 | pathogenic | -1.499 | Destabilizing | 1.0 | D | 0.527 | neutral | None | None | None | None | I |
V/I | 0.1412 | likely_benign | 0.1295 | benign | -0.634 | Destabilizing | 0.997 | D | 0.491 | neutral | None | None | None | None | I |
V/K | 0.9494 | likely_pathogenic | 0.8889 | pathogenic | -1.139 | Destabilizing | 0.999 | D | 0.455 | neutral | None | None | None | None | I |
V/L | 0.712 | likely_pathogenic | 0.6013 | pathogenic | -0.634 | Destabilizing | 0.987 | D | 0.47 | neutral | D | 0.607992112 | None | None | I |
V/M | 0.5455 | ambiguous | 0.4661 | ambiguous | -0.557 | Destabilizing | 0.999 | D | 0.495 | neutral | D | 0.804446607 | None | None | I |
V/N | 0.9301 | likely_pathogenic | 0.8866 | pathogenic | -1.015 | Destabilizing | 1.0 | D | 0.549 | neutral | None | None | None | None | I |
V/P | 0.991 | likely_pathogenic | 0.9846 | pathogenic | -0.919 | Destabilizing | 0.269 | N | 0.315 | neutral | None | None | None | None | I |
V/Q | 0.9281 | likely_pathogenic | 0.8822 | pathogenic | -1.115 | Destabilizing | 1.0 | D | 0.475 | neutral | None | None | None | None | I |
V/R | 0.9361 | likely_pathogenic | 0.8732 | pathogenic | -0.745 | Destabilizing | 1.0 | D | 0.545 | neutral | None | None | None | None | I |
V/S | 0.8404 | likely_pathogenic | 0.7773 | pathogenic | -1.648 | Destabilizing | 0.999 | D | 0.436 | neutral | None | None | None | None | I |
V/T | 0.6555 | likely_pathogenic | 0.6037 | pathogenic | -1.474 | Destabilizing | 0.996 | D | 0.491 | neutral | None | None | None | None | I |
V/W | 0.9924 | likely_pathogenic | 0.9861 | pathogenic | -1.37 | Destabilizing | 1.0 | D | 0.565 | neutral | None | None | None | None | I |
V/Y | 0.9592 | likely_pathogenic | 0.9287 | pathogenic | -1.042 | Destabilizing | 1.0 | D | 0.449 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.