Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5288 | 16087;16088;16089 | chr2:178733431;178733430;178733429 | chr2:179598158;179598157;179598156 |
N2AB | 4971 | 15136;15137;15138 | chr2:178733431;178733430;178733429 | chr2:179598158;179598157;179598156 |
N2A | 4044 | 12355;12356;12357 | chr2:178733431;178733430;178733429 | chr2:179598158;179598157;179598156 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | D | 0.639 | 0.728 | 0.895153570487 | gnomAD-4.0.0 | 1.36842E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79895E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.4158 | ambiguous | 0.5503 | ambiguous | -0.355 | Destabilizing | 1.0 | D | 0.669 | neutral | D | 0.674896769 | None | None | I |
P/C | 0.9428 | likely_pathogenic | 0.9691 | pathogenic | -0.631 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
P/D | 0.9135 | likely_pathogenic | 0.9595 | pathogenic | -0.368 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | I |
P/E | 0.7967 | likely_pathogenic | 0.9041 | pathogenic | -0.493 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | I |
P/F | 0.9644 | likely_pathogenic | 0.9859 | pathogenic | -0.696 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | I |
P/G | 0.8096 | likely_pathogenic | 0.871 | pathogenic | -0.443 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | I |
P/H | 0.8503 | likely_pathogenic | 0.9258 | pathogenic | -0.016 | Destabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | I |
P/I | 0.8552 | likely_pathogenic | 0.9326 | pathogenic | -0.273 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | I |
P/K | 0.8792 | likely_pathogenic | 0.9532 | pathogenic | -0.372 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
P/L | 0.5818 | likely_pathogenic | 0.786 | pathogenic | -0.273 | Destabilizing | 1.0 | D | 0.639 | neutral | D | 0.812980435 | None | None | I |
P/M | 0.8129 | likely_pathogenic | 0.9122 | pathogenic | -0.433 | Destabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | I |
P/N | 0.9089 | likely_pathogenic | 0.9504 | pathogenic | -0.102 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | I |
P/Q | 0.7417 | likely_pathogenic | 0.874 | pathogenic | -0.36 | Destabilizing | 1.0 | D | 0.647 | neutral | D | 0.749533781 | None | None | I |
P/R | 0.77 | likely_pathogenic | 0.9018 | pathogenic | 0.142 | Stabilizing | 1.0 | D | 0.633 | neutral | D | 0.761664472 | None | None | I |
P/S | 0.6639 | likely_pathogenic | 0.7735 | pathogenic | -0.412 | Destabilizing | 1.0 | D | 0.652 | neutral | D | 0.730104398 | None | None | I |
P/T | 0.5147 | ambiguous | 0.6299 | pathogenic | -0.443 | Destabilizing | 1.0 | D | 0.647 | neutral | D | 0.712968835 | None | None | I |
P/V | 0.7162 | likely_pathogenic | 0.8384 | pathogenic | -0.269 | Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | I |
P/W | 0.9733 | likely_pathogenic | 0.9905 | pathogenic | -0.758 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
P/Y | 0.9552 | likely_pathogenic | 0.981 | pathogenic | -0.463 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.