Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5297 | 16114;16115;16116 | chr2:178733404;178733403;178733402 | chr2:179598131;179598130;179598129 |
N2AB | 4980 | 15163;15164;15165 | chr2:178733404;178733403;178733402 | chr2:179598131;179598130;179598129 |
N2A | 4053 | 12382;12383;12384 | chr2:178733404;178733403;178733402 | chr2:179598131;179598130;179598129 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | rs2080895374 | None | 0.999 | D | 0.614 | 0.417 | 0.689665905704 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.92901E-04 | None | 0 | 0 | 0 | 0 | 0 |
D/Y | rs2080895374 | None | 0.999 | D | 0.614 | 0.417 | 0.689665905704 | gnomAD-4.0.0 | 2.56232E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.42483E-05 | None | 0 | 0 | 0 | 0 | 2.84446E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.259 | likely_benign | 0.3354 | benign | -0.612 | Destabilizing | 0.885 | D | 0.53 | neutral | D | 0.610357677 | None | None | I |
D/C | 0.718 | likely_pathogenic | 0.768 | pathogenic | -0.262 | Destabilizing | 0.999 | D | 0.626 | neutral | None | None | None | None | I |
D/E | 0.2357 | likely_benign | 0.3167 | benign | -0.441 | Destabilizing | 0.046 | N | 0.271 | neutral | N | 0.519561744 | None | None | I |
D/F | 0.713 | likely_pathogenic | 0.7928 | pathogenic | -0.26 | Destabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | I |
D/G | 0.1722 | likely_benign | 0.2042 | benign | -0.878 | Destabilizing | 0.046 | N | 0.347 | neutral | N | 0.509970307 | None | None | I |
D/H | 0.4513 | ambiguous | 0.5045 | ambiguous | -0.232 | Destabilizing | 0.998 | D | 0.52 | neutral | D | 0.66398163 | None | None | I |
D/I | 0.7012 | likely_pathogenic | 0.7711 | pathogenic | 0.069 | Stabilizing | 0.993 | D | 0.635 | neutral | None | None | None | None | I |
D/K | 0.6471 | likely_pathogenic | 0.686 | pathogenic | -0.12 | Destabilizing | 0.973 | D | 0.509 | neutral | None | None | None | None | I |
D/L | 0.5966 | likely_pathogenic | 0.6771 | pathogenic | 0.069 | Stabilizing | 0.986 | D | 0.641 | neutral | None | None | None | None | I |
D/M | 0.7592 | likely_pathogenic | 0.8338 | pathogenic | 0.298 | Stabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | I |
D/N | 0.1116 | likely_benign | 0.124 | benign | -0.524 | Destabilizing | 0.982 | D | 0.482 | neutral | N | 0.448020626 | None | None | I |
D/P | 0.972 | likely_pathogenic | 0.9818 | pathogenic | -0.135 | Destabilizing | 0.993 | D | 0.555 | neutral | None | None | None | None | I |
D/Q | 0.511 | ambiguous | 0.5925 | pathogenic | -0.447 | Destabilizing | 0.973 | D | 0.519 | neutral | None | None | None | None | I |
D/R | 0.641 | likely_pathogenic | 0.6796 | pathogenic | 0.155 | Stabilizing | 0.986 | D | 0.568 | neutral | None | None | None | None | I |
D/S | 0.1956 | likely_benign | 0.2465 | benign | -0.689 | Destabilizing | 0.953 | D | 0.473 | neutral | None | None | None | None | I |
D/T | 0.5391 | ambiguous | 0.6219 | pathogenic | -0.474 | Destabilizing | 0.986 | D | 0.525 | neutral | None | None | None | None | I |
D/V | 0.464 | ambiguous | 0.5433 | ambiguous | -0.135 | Destabilizing | 0.991 | D | 0.648 | neutral | D | 0.624705653 | None | None | I |
D/W | 0.9067 | likely_pathogenic | 0.9351 | pathogenic | -0.02 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | I |
D/Y | 0.305 | likely_benign | 0.343 | ambiguous | -0.01 | Destabilizing | 0.999 | D | 0.614 | neutral | D | 0.735468477 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.