Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5307 | 16144;16145;16146 | chr2:178733374;178733373;178733372 | chr2:179598101;179598100;179598099 |
N2AB | 4990 | 15193;15194;15195 | chr2:178733374;178733373;178733372 | chr2:179598101;179598100;179598099 |
N2A | 4063 | 12412;12413;12414 | chr2:178733374;178733373;178733372 | chr2:179598101;179598100;179598099 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/D | rs1349650603 | -3.215 | 0.901 | D | 0.699 | 0.594 | 0.738898308675 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
Y/D | rs1349650603 | -3.215 | 0.901 | D | 0.699 | 0.594 | 0.738898308675 | gnomAD-4.0.0 | 1.59123E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8582E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8366 | likely_pathogenic | 0.7986 | pathogenic | -2.562 | Highly Destabilizing | 0.775 | D | 0.587 | neutral | None | None | None | None | N |
Y/C | 0.2888 | likely_benign | 0.2331 | benign | -1.605 | Destabilizing | 0.018 | N | 0.503 | neutral | D | 0.576164699 | None | None | N |
Y/D | 0.8652 | likely_pathogenic | 0.8406 | pathogenic | -2.147 | Highly Destabilizing | 0.901 | D | 0.699 | prob.neutral | D | 0.633562291 | None | None | N |
Y/E | 0.9407 | likely_pathogenic | 0.9228 | pathogenic | -1.955 | Destabilizing | 0.923 | D | 0.631 | neutral | None | None | None | None | N |
Y/F | 0.1727 | likely_benign | 0.1603 | benign | -0.832 | Destabilizing | 0.84 | D | 0.542 | neutral | N | 0.510265694 | None | None | N |
Y/G | 0.7786 | likely_pathogenic | 0.7403 | pathogenic | -2.975 | Highly Destabilizing | 0.923 | D | 0.648 | neutral | None | None | None | None | N |
Y/H | 0.4888 | ambiguous | 0.3869 | ambiguous | -1.479 | Destabilizing | 0.008 | N | 0.343 | neutral | N | 0.493472218 | None | None | N |
Y/I | 0.7116 | likely_pathogenic | 0.6703 | pathogenic | -1.231 | Destabilizing | 0.961 | D | 0.646 | neutral | None | None | None | None | N |
Y/K | 0.9341 | likely_pathogenic | 0.9083 | pathogenic | -1.917 | Destabilizing | 0.923 | D | 0.629 | neutral | None | None | None | None | N |
Y/L | 0.7039 | likely_pathogenic | 0.6661 | pathogenic | -1.231 | Destabilizing | 0.775 | D | 0.557 | neutral | None | None | None | None | N |
Y/M | 0.7988 | likely_pathogenic | 0.7756 | pathogenic | -1.04 | Destabilizing | 0.996 | D | 0.637 | neutral | None | None | None | None | N |
Y/N | 0.5292 | ambiguous | 0.4688 | ambiguous | -2.62 | Highly Destabilizing | 0.82 | D | 0.643 | neutral | D | 0.694703242 | None | None | N |
Y/P | 0.9881 | likely_pathogenic | 0.9856 | pathogenic | -1.682 | Destabilizing | 0.987 | D | 0.727 | prob.delet. | None | None | None | None | N |
Y/Q | 0.8659 | likely_pathogenic | 0.8155 | pathogenic | -2.332 | Highly Destabilizing | 0.923 | D | 0.674 | neutral | None | None | None | None | N |
Y/R | 0.8754 | likely_pathogenic | 0.8285 | pathogenic | -1.75 | Destabilizing | 0.923 | D | 0.681 | prob.neutral | None | None | None | None | N |
Y/S | 0.6342 | likely_pathogenic | 0.5732 | pathogenic | -3.102 | Highly Destabilizing | 0.901 | D | 0.629 | neutral | D | 0.586092347 | None | None | N |
Y/T | 0.8026 | likely_pathogenic | 0.7598 | pathogenic | -2.788 | Highly Destabilizing | 0.961 | D | 0.633 | neutral | None | None | None | None | N |
Y/V | 0.6042 | likely_pathogenic | 0.5684 | pathogenic | -1.682 | Destabilizing | 0.775 | D | 0.58 | neutral | None | None | None | None | N |
Y/W | 0.6539 | likely_pathogenic | 0.6326 | pathogenic | -0.219 | Destabilizing | 0.996 | D | 0.57 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.