Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5315 | 16168;16169;16170 | chr2:178733350;178733349;178733348 | chr2:179598077;179598076;179598075 |
N2AB | 4998 | 15217;15218;15219 | chr2:178733350;178733349;178733348 | chr2:179598077;179598076;179598075 |
N2A | 4071 | 12436;12437;12438 | chr2:178733350;178733349;178733348 | chr2:179598077;179598076;179598075 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.151 | 0.089 | 0.336647302497 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2301 | likely_benign | 0.2789 | benign | -1.607 | Destabilizing | 0.052 | N | 0.411 | neutral | D | 0.530776786 | None | None | N |
V/C | 0.7673 | likely_pathogenic | 0.8103 | pathogenic | -1.098 | Destabilizing | 0.935 | D | 0.559 | neutral | None | None | None | None | N |
V/D | 0.4961 | ambiguous | 0.5866 | pathogenic | -1.685 | Destabilizing | 0.484 | N | 0.641 | neutral | D | 0.530238119 | None | None | N |
V/E | 0.3393 | likely_benign | 0.3858 | ambiguous | -1.674 | Destabilizing | 0.555 | D | 0.589 | neutral | None | None | None | None | N |
V/F | 0.1958 | likely_benign | 0.221 | benign | -1.274 | Destabilizing | 0.317 | N | 0.583 | neutral | D | 0.555795603 | None | None | N |
V/G | 0.3909 | ambiguous | 0.4729 | ambiguous | -1.936 | Destabilizing | 0.484 | N | 0.615 | neutral | N | 0.508048647 | None | None | N |
V/H | 0.5502 | ambiguous | 0.6213 | pathogenic | -1.509 | Destabilizing | 0.935 | D | 0.658 | neutral | None | None | None | None | N |
V/I | 0.0652 | likely_benign | 0.0647 | benign | -0.788 | Destabilizing | None | N | 0.151 | neutral | N | 0.493921296 | None | None | N |
V/K | 0.3119 | likely_benign | 0.3487 | ambiguous | -1.23 | Destabilizing | 0.555 | D | 0.594 | neutral | None | None | None | None | N |
V/L | 0.2111 | likely_benign | 0.2377 | benign | -0.788 | Destabilizing | 0.009 | N | 0.365 | neutral | N | 0.505537016 | None | None | N |
V/M | 0.1292 | likely_benign | 0.1419 | benign | -0.615 | Destabilizing | 0.38 | N | 0.482 | neutral | None | None | None | None | N |
V/N | 0.3366 | likely_benign | 0.3866 | ambiguous | -1.062 | Destabilizing | 0.555 | D | 0.659 | neutral | None | None | None | None | N |
V/P | 0.9655 | likely_pathogenic | 0.9807 | pathogenic | -1.028 | Destabilizing | 0.791 | D | 0.635 | neutral | None | None | None | None | N |
V/Q | 0.3265 | likely_benign | 0.3617 | ambiguous | -1.249 | Destabilizing | 0.791 | D | 0.65 | neutral | None | None | None | None | N |
V/R | 0.2813 | likely_benign | 0.3185 | benign | -0.738 | Destabilizing | 0.555 | D | 0.682 | prob.neutral | None | None | None | None | N |
V/S | 0.2842 | likely_benign | 0.3431 | ambiguous | -1.581 | Destabilizing | 0.081 | N | 0.591 | neutral | None | None | None | None | N |
V/T | 0.1663 | likely_benign | 0.1983 | benign | -1.465 | Destabilizing | 0.001 | N | 0.137 | neutral | None | None | None | None | N |
V/W | 0.8247 | likely_pathogenic | 0.8723 | pathogenic | -1.492 | Destabilizing | 0.935 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/Y | 0.5541 | ambiguous | 0.6098 | pathogenic | -1.189 | Destabilizing | 0.555 | D | 0.595 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.