Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5317 | 16174;16175;16176 | chr2:178733344;178733343;178733342 | chr2:179598071;179598070;179598069 |
N2AB | 5000 | 15223;15224;15225 | chr2:178733344;178733343;178733342 | chr2:179598071;179598070;179598069 |
N2A | 4073 | 12442;12443;12444 | chr2:178733344;178733343;178733342 | chr2:179598071;179598070;179598069 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | rs1210762968 | -1.363 | 0.425 | N | 0.359 | 0.135 | 0.281381271821 | gnomAD-4.0.0 | 4.10532E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39678E-06 | 0 | 0 |
Q/P | rs1230882379 | None | 0.784 | D | 0.535 | 0.404 | 0.362960570912 | gnomAD-4.0.0 | 3.18257E-06 | None | None | None | None | N | None | 1.13084E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2857 | likely_benign | 0.2773 | benign | -0.672 | Destabilizing | 0.176 | N | 0.321 | neutral | None | None | None | None | N |
Q/C | 0.6455 | likely_pathogenic | 0.5984 | pathogenic | -0.461 | Destabilizing | 0.981 | D | 0.559 | neutral | None | None | None | None | N |
Q/D | 0.65 | likely_pathogenic | 0.647 | pathogenic | -1.884 | Destabilizing | 0.495 | N | 0.343 | neutral | None | None | None | None | N |
Q/E | 0.1118 | likely_benign | 0.1184 | benign | -1.689 | Destabilizing | 0.425 | N | 0.359 | neutral | N | 0.468534326 | None | None | N |
Q/F | 0.6479 | likely_pathogenic | 0.6295 | pathogenic | -0.262 | Destabilizing | 0.944 | D | 0.59 | neutral | None | None | None | None | N |
Q/G | 0.4385 | ambiguous | 0.4308 | ambiguous | -1.082 | Destabilizing | 0.329 | N | 0.475 | neutral | None | None | None | None | N |
Q/H | 0.2329 | likely_benign | 0.2198 | benign | -1.009 | Destabilizing | 0.975 | D | 0.489 | neutral | N | 0.495744649 | None | None | N |
Q/I | 0.3339 | likely_benign | 0.3277 | benign | 0.409 | Stabilizing | 0.543 | D | 0.529 | neutral | None | None | None | None | N |
Q/K | 0.1612 | likely_benign | 0.1578 | benign | -0.599 | Destabilizing | 0.425 | N | 0.366 | neutral | N | 0.458389956 | None | None | N |
Q/L | 0.1511 | likely_benign | 0.1477 | benign | 0.409 | Stabilizing | 0.27 | N | 0.467 | neutral | N | 0.468678129 | None | None | N |
Q/M | 0.3405 | ambiguous | 0.3318 | benign | 0.662 | Stabilizing | 0.944 | D | 0.471 | neutral | None | None | None | None | N |
Q/N | 0.3882 | ambiguous | 0.3663 | ambiguous | -1.38 | Destabilizing | 0.704 | D | 0.344 | neutral | None | None | None | None | N |
Q/P | 0.9032 | likely_pathogenic | 0.8978 | pathogenic | 0.079 | Stabilizing | 0.784 | D | 0.535 | neutral | D | 0.531368121 | None | None | N |
Q/R | 0.1547 | likely_benign | 0.1575 | benign | -0.682 | Destabilizing | 0.642 | D | 0.343 | neutral | N | 0.431352856 | None | None | N |
Q/S | 0.2817 | likely_benign | 0.269 | benign | -1.442 | Destabilizing | 0.013 | N | 0.136 | neutral | None | None | None | None | N |
Q/T | 0.2076 | likely_benign | 0.202 | benign | -1.066 | Destabilizing | 0.004 | N | 0.228 | neutral | None | None | None | None | N |
Q/V | 0.2319 | likely_benign | 0.2343 | benign | 0.079 | Stabilizing | 0.013 | N | 0.341 | neutral | None | None | None | None | N |
Q/W | 0.5921 | likely_pathogenic | 0.5817 | pathogenic | -0.35 | Destabilizing | 0.995 | D | 0.567 | neutral | None | None | None | None | N |
Q/Y | 0.4281 | ambiguous | 0.4045 | ambiguous | 0.029 | Stabilizing | 0.981 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.