Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5321 | 16186;16187;16188 | chr2:178733332;178733331;178733330 | chr2:179598059;179598058;179598057 |
N2AB | 5004 | 15235;15236;15237 | chr2:178733332;178733331;178733330 | chr2:179598059;179598058;179598057 |
N2A | 4077 | 12454;12455;12456 | chr2:178733332;178733331;178733330 | chr2:179598059;179598058;179598057 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.999 | N | 0.476 | 0.484 | 0.635582896387 | gnomAD-4.0.0 | 1.59131E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.4993 | ambiguous | 0.4963 | ambiguous | -1.274 | Destabilizing | 0.969 | D | 0.393 | neutral | None | None | None | None | N |
Y/C | 0.2202 | likely_benign | 0.1875 | benign | -0.327 | Destabilizing | 0.999 | D | 0.476 | neutral | N | 0.509494959 | None | None | N |
Y/D | 0.4326 | ambiguous | 0.4029 | ambiguous | 0.615 | Stabilizing | 0.996 | D | 0.503 | neutral | N | 0.441423793 | None | None | N |
Y/E | 0.7574 | likely_pathogenic | 0.746 | pathogenic | 0.647 | Stabilizing | 0.997 | D | 0.45 | neutral | None | None | None | None | N |
Y/F | 0.1233 | likely_benign | 0.1222 | benign | -0.432 | Destabilizing | 0.92 | D | 0.371 | neutral | N | 0.492859091 | None | None | N |
Y/G | 0.4907 | ambiguous | 0.4978 | ambiguous | -1.526 | Destabilizing | 0.997 | D | 0.457 | neutral | None | None | None | None | N |
Y/H | 0.241 | likely_benign | 0.218 | benign | -0.128 | Destabilizing | 0.996 | D | 0.411 | neutral | N | 0.442620588 | None | None | N |
Y/I | 0.4681 | ambiguous | 0.4299 | ambiguous | -0.574 | Destabilizing | 0.884 | D | 0.337 | neutral | None | None | None | None | N |
Y/K | 0.7693 | likely_pathogenic | 0.7502 | pathogenic | -0.34 | Destabilizing | 0.997 | D | 0.437 | neutral | None | None | None | None | N |
Y/L | 0.3465 | ambiguous | 0.3235 | benign | -0.574 | Destabilizing | 0.007 | N | 0.155 | neutral | None | None | None | None | N |
Y/M | 0.662 | likely_pathogenic | 0.6489 | pathogenic | -0.419 | Destabilizing | 0.982 | D | 0.426 | neutral | None | None | None | None | N |
Y/N | 0.2086 | likely_benign | 0.1945 | benign | -0.589 | Destabilizing | 0.996 | D | 0.489 | neutral | N | 0.437780413 | None | None | N |
Y/P | 0.6228 | likely_pathogenic | 0.6466 | pathogenic | -0.792 | Destabilizing | 0.997 | D | 0.505 | neutral | None | None | None | None | N |
Y/Q | 0.589 | likely_pathogenic | 0.5613 | ambiguous | -0.494 | Destabilizing | 0.997 | D | 0.434 | neutral | None | None | None | None | N |
Y/R | 0.5698 | likely_pathogenic | 0.5555 | ambiguous | -0.028 | Destabilizing | 0.997 | D | 0.483 | neutral | None | None | None | None | N |
Y/S | 0.1876 | likely_benign | 0.1838 | benign | -1.12 | Destabilizing | 0.996 | D | 0.432 | neutral | N | 0.392249425 | None | None | N |
Y/T | 0.4417 | ambiguous | 0.4318 | ambiguous | -0.995 | Destabilizing | 0.969 | D | 0.415 | neutral | None | None | None | None | N |
Y/V | 0.401 | ambiguous | 0.3783 | ambiguous | -0.792 | Destabilizing | 0.759 | D | 0.33 | neutral | None | None | None | None | N |
Y/W | 0.5593 | ambiguous | 0.5517 | ambiguous | -0.303 | Destabilizing | 0.999 | D | 0.404 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.