Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5323 | 16192;16193;16194 | chr2:178733326;178733325;178733324 | chr2:179598053;179598052;179598051 |
N2AB | 5006 | 15241;15242;15243 | chr2:178733326;178733325;178733324 | chr2:179598053;179598052;179598051 |
N2A | 4079 | 12460;12461;12462 | chr2:178733326;178733325;178733324 | chr2:179598053;179598052;179598051 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.046 | D | 0.295 | 0.458 | 0.462461958149 | gnomAD-4.0.0 | 1.59137E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85832E-06 | 0 | 0 |
A/T | rs745667963 | -1.293 | 0.322 | N | 0.353 | 0.227 | None | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 1.29199E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/T | rs745667963 | -1.293 | 0.322 | N | 0.353 | 0.227 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/T | rs745667963 | -1.293 | 0.322 | N | 0.353 | 0.227 | None | gnomAD-4.0.0 | 3.84332E-06 | None | None | None | None | N | None | 5.0734E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6701 | likely_pathogenic | 0.6307 | pathogenic | -1.889 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
A/D | 0.9824 | likely_pathogenic | 0.9772 | pathogenic | -2.664 | Highly Destabilizing | 0.982 | D | 0.645 | neutral | D | 0.750296045 | None | None | N |
A/E | 0.9649 | likely_pathogenic | 0.9584 | pathogenic | -2.511 | Highly Destabilizing | 0.986 | D | 0.661 | neutral | None | None | None | None | N |
A/F | 0.9298 | likely_pathogenic | 0.9092 | pathogenic | -0.944 | Destabilizing | 0.993 | D | 0.671 | neutral | None | None | None | None | N |
A/G | 0.473 | ambiguous | 0.4226 | ambiguous | -1.612 | Destabilizing | 0.046 | N | 0.295 | neutral | D | 0.690597404 | None | None | N |
A/H | 0.9828 | likely_pathogenic | 0.9789 | pathogenic | -1.798 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
A/I | 0.5254 | ambiguous | 0.4526 | ambiguous | -0.138 | Destabilizing | 0.986 | D | 0.663 | neutral | None | None | None | None | N |
A/K | 0.9886 | likely_pathogenic | 0.9855 | pathogenic | -1.291 | Destabilizing | 0.986 | D | 0.662 | neutral | None | None | None | None | N |
A/L | 0.5325 | ambiguous | 0.463 | ambiguous | -0.138 | Destabilizing | 0.91 | D | 0.619 | neutral | None | None | None | None | N |
A/M | 0.5844 | likely_pathogenic | 0.5169 | ambiguous | -0.644 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
A/N | 0.9307 | likely_pathogenic | 0.9088 | pathogenic | -1.628 | Destabilizing | 0.986 | D | 0.657 | neutral | None | None | None | None | N |
A/P | 0.7885 | likely_pathogenic | 0.7921 | pathogenic | -0.454 | Destabilizing | 0.991 | D | 0.665 | neutral | D | 0.603794423 | None | None | N |
A/Q | 0.9525 | likely_pathogenic | 0.9463 | pathogenic | -1.55 | Destabilizing | 0.993 | D | 0.658 | neutral | None | None | None | None | N |
A/R | 0.9726 | likely_pathogenic | 0.9669 | pathogenic | -1.265 | Destabilizing | 0.993 | D | 0.665 | neutral | None | None | None | None | N |
A/S | 0.2184 | likely_benign | 0.1842 | benign | -2.022 | Highly Destabilizing | 0.885 | D | 0.454 | neutral | D | 0.615156598 | None | None | N |
A/T | 0.1736 | likely_benign | 0.1398 | benign | -1.751 | Destabilizing | 0.322 | N | 0.353 | neutral | N | 0.516874392 | None | None | N |
A/V | 0.1843 | likely_benign | 0.1487 | benign | -0.454 | Destabilizing | 0.885 | D | 0.553 | neutral | N | 0.459339332 | None | None | N |
A/W | 0.9914 | likely_pathogenic | 0.9898 | pathogenic | -1.545 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
A/Y | 0.9802 | likely_pathogenic | 0.9754 | pathogenic | -1.054 | Destabilizing | 0.998 | D | 0.669 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.