Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5332 | 16219;16220;16221 | chr2:178733299;178733298;178733297 | chr2:179598026;179598025;179598024 |
N2AB | 5015 | 15268;15269;15270 | chr2:178733299;178733298;178733297 | chr2:179598026;179598025;179598024 |
N2A | 4088 | 12487;12488;12489 | chr2:178733299;178733298;178733297 | chr2:179598026;179598025;179598024 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1232516805 | None | 0.051 | N | 0.514 | 0.262 | 0.313210971179 | gnomAD-4.0.0 | 4.10644E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39809E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.095 | likely_benign | 0.1053 | benign | -1.36 | Destabilizing | 0.454 | N | 0.497 | neutral | N | 0.487980739 | None | None | N |
T/C | 0.4163 | ambiguous | 0.4347 | ambiguous | -0.946 | Destabilizing | 0.998 | D | 0.653 | neutral | None | None | None | None | N |
T/D | 0.5554 | ambiguous | 0.6072 | pathogenic | -1.337 | Destabilizing | 0.842 | D | 0.664 | neutral | None | None | None | None | N |
T/E | 0.4263 | ambiguous | 0.4603 | ambiguous | -1.13 | Destabilizing | 0.842 | D | 0.642 | neutral | None | None | None | None | N |
T/F | 0.2497 | likely_benign | 0.2701 | benign | -1.018 | Destabilizing | 0.974 | D | 0.641 | neutral | None | None | None | None | N |
T/G | 0.3181 | likely_benign | 0.3499 | ambiguous | -1.767 | Destabilizing | 0.728 | D | 0.639 | neutral | None | None | None | None | N |
T/H | 0.2329 | likely_benign | 0.2474 | benign | -1.743 | Destabilizing | 0.991 | D | 0.642 | neutral | None | None | None | None | N |
T/I | 0.1362 | likely_benign | 0.1331 | benign | -0.285 | Destabilizing | 0.051 | N | 0.514 | neutral | N | 0.512931335 | None | None | N |
T/K | 0.1881 | likely_benign | 0.1882 | benign | -0.416 | Destabilizing | 0.022 | N | 0.389 | neutral | N | 0.499828752 | None | None | N |
T/L | 0.1129 | likely_benign | 0.1132 | benign | -0.285 | Destabilizing | 0.525 | D | 0.611 | neutral | None | None | None | None | N |
T/M | 0.0948 | likely_benign | 0.1011 | benign | -0.317 | Destabilizing | 0.974 | D | 0.666 | neutral | None | None | None | None | N |
T/N | 0.1628 | likely_benign | 0.1786 | benign | -1.07 | Destabilizing | 0.842 | D | 0.629 | neutral | None | None | None | None | N |
T/P | 0.7864 | likely_pathogenic | 0.8083 | pathogenic | -0.614 | Destabilizing | 0.966 | D | 0.695 | prob.neutral | N | 0.515581649 | None | None | N |
T/Q | 0.2474 | likely_benign | 0.2577 | benign | -0.882 | Destabilizing | 0.949 | D | 0.692 | prob.neutral | None | None | None | None | N |
T/R | 0.1343 | likely_benign | 0.1398 | benign | -0.618 | Destabilizing | 0.012 | N | 0.507 | neutral | N | 0.455847153 | None | None | N |
T/S | 0.1157 | likely_benign | 0.1316 | benign | -1.375 | Destabilizing | 0.051 | N | 0.305 | neutral | N | 0.442743318 | None | None | N |
T/V | 0.1279 | likely_benign | 0.1265 | benign | -0.614 | Destabilizing | 0.525 | D | 0.585 | neutral | None | None | None | None | N |
T/W | 0.6129 | likely_pathogenic | 0.6644 | pathogenic | -1.075 | Destabilizing | 0.998 | D | 0.663 | neutral | None | None | None | None | N |
T/Y | 0.2953 | likely_benign | 0.32 | benign | -0.724 | Destabilizing | 0.991 | D | 0.639 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.